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Metabolic Labeling of Newly Transcribed RNA for High Resolution Gene Expression Profiling of RNA Synthesis, Processing and Decay in Cell Culture
Journal JoVE
Biologie
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Journal JoVE Biologie
Metabolic Labeling of Newly Transcribed RNA for High Resolution Gene Expression Profiling of RNA Synthesis, Processing and Decay in Cell Culture
DOI:

11:00 min

August 08, 2013

, , , , ,

Chapitres

  • 00:05Titre
  • 01:44Metabolic Labeling with 4-thiouridine
  • 03:05Thiol-specific Biotinylation of Newly Transcribed RNA
  • 05:09Separation of Labeled and Unlabeled RNA Using Streptavidin-coated Magnetic Beads
  • 07:00Recovery of Newly Transcribed RNA
  • 08:17Results: Metabolic Labeling of Newly Transcribed RNA
  • 10:25Conclusion

Summary

Traduction automatique

Total cellular RNA provides a poor template for studying short-term changes in RNA synthesis and decay as well as the kinetics of RNA processing. Here, we describe metabolic labeling of newly transcribed RNA with 4-thiouridine followed by thiol-specific biotinylation and purification of newly transcribed RNA allowing to overcome these limitations.

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