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Bioinformatikk ressurser for studiet av Glycan-mediert protein interaksjoner
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Journal JoVE Biologie
Bioinformatics Resources for the Study of Glycan-Mediated Protein Interactions

Bioinformatikk ressurser for studiet av Glycan-mediert protein interaksjoner

DOI:
10.3791/63356-v

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11:21 min

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January 20, 2022

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1Proteome Informatics Group,SIB Swiss Institute of Bioinformatics, 2Computer Science Department,University of Geneva, 3Section of Biology,University of Geneva

Chapitres

  • 00:05Introduction
  • 01:11Accessing Resources from Glyco@Expasy and Exploring the Contextual Information of a Protein N-Glycome
  • 02:43Visualizing and Correlating the Contextual Information of a Protein N-Glycome
  • 05:38Glycan-Binding Information in UniLectin
  • 06:59Browsing the HGI Challenge High Confidence Dataset
  • 07:45Comparing the O-Glycome of a Selected Serum Protein in GlyConnect
  • 08:47Results: Combining Outputs of GlyConnect Octopus, GlyConnect Compozitor, and UniLectin
  • 10:49Conclusion

Summary

Traduction automatique

Traduction automatique

Denne protokollen illustrerer hvordan man utforsker, sammenligner og tolker humant protein glykom med online ressurser.

Tags

Keywords: BioinformaticsGlycoinformaticsGlycomicsGlycoproteomicsGlycan-mediated Protein InteractionsGlycoproteomeGlyConnectProstate-specific Antigen (PSA)Glycan StructuresGlycan CompositionsOctopusN-linked GlycansHybrid GlycansSialylated Glycans

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