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13.4:

Sintenia ed evoluzione

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Biologia Molecolare
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JoVE Core Biologia Molecolare
Synteny and Evolution

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Condividere

Synteny in classical terms refers to the genes present on the same chromosome, like beads on the same string. For example, consider species X, which has genes A, B, and C present on one chromosome. These genes are said to be syntenic in species X. Then consider another species, Y, with alleles A1, B1, and C1 on another chromosome. These genes are also said to be syntenic in species Y. In evolutionary perspective, synteny refers to the phenomenon of co-localization of genes on a chromosome of two or more different species. Therefore, the genes A and A1, B and B1 and C and C1 represent a synteny between the two species, X and Y. In addition, the genes present in common chromosomal regions in two or more species, like the genes A, B and C, represent a conserved syntenic segment or conserved syntenic blocks. During the course of evolution, species undergo random mutations, survive natural selection and evolve into several lineages all while mostly maintaining conserved syntenic blocks over many chromosomes. For example, around 85 million years ago, humans and tree shrews shared a common mammalian ancestor. Even after millions of years of divergence, several genes present on the long arm of human chromosome 10 and the tree shrew’s chromosome 16 show conserved synteny in some regions. This indicates that an ancestral mammalian chromosome evolved into chromosome 16 in the tree shrew, and also the long arm of chromosome 10 in humans. Based on synteny analysis and high resolution DNA data from all known modern primates, scientists have proposed a karyotype for the common ancestor of all of these species. The matching colors shown in the human and ancestral chromosomes indicate the conserved syntenic blocks and ancestral chromosomes from which human chromosomes evolved. These ancestral chromosomes would have undergone several rounds of chromosome rearrangement, fusion or breakage, facilitating diversity and speciation into the primate species of today.

13.4:

Sintenia ed evoluzione

John H. Renwick first coined the term “synteny” in 1971, which refers to the genes present on the same chromosomes, even if they are not genetically linked. The species with common ancestry tend to show conserved syntenic regions. Therefore, the concept of synteny is nowadays used to describe the evolutionary relationship between species.

Around 80 million years ago, the human and mice lineages diverged from the common ancestor. During the course of evolution, the ancestral chromosome underwent several rearrangements, breakage, and fusion events to evolve into the chromosomes of mice and humans. For example, it took around 180 chromosomal breakage-and-rejoining events for the evolution of ancestral chromosomes into human and mice chromosomes. Yet, several regions of chromosomes in both mice and humans have maintained common gene order or synteny. For example, over 510,000 base pairs of mouse chromosome 12 share syntenic blocks with human chromosome 14. In the future, when  the evolutionary distance between two species will increase, the number of chromosomal breakage-and-rejoining events will increase, and the synteny will decrease.

Primate ancestral karyotype

Based on synteny relation and DNA sequence analysis, scientists have predicted the karyotype of all primate ancestors. Synteny between humans and other primates such as chimpanzees, gorillas, and other living primate species reveals that human chromosomes are derived from ancestral chromosomes by several chromosomal breakage-and-rejoining events. Such large-scale chromosome rearrangements are rare, like once in 5 million years. But whenever they occur, they are most likely to lead to the evolution of a new species. A comparison between human chromosomes with the proposed primate ancestral karyotype shows several chromosome rearrangements. For example, the fusion of ancestral chromosomes 9 and 11 formed the human chromosome 2; or the reciprocal translocation of ancestral chromosomes 14 and 21 led to the evolution of human chromosomes 12 and 22.

Suggested Reading

  1. Molecular Cell Biology, Lodish, 8th edition, Pages 25,26f,342
  2. Molecular Biology of Cell, Alberts, 6th edition, Pages 221-222, 224-225
  3. Eichler, Evan E., and David Sankoff. "Structural dynamics of eukaryotic chromosome evolution." science 301, no. 5634 (2003): 793-797.