Rivista
/
Biologia
/
Genomic MRI - a Public Resource for Studying Sequence Patterns within Genomic DNA
JoVE Journal
Biologia
This content is Free Access.
JoVE Journal Biologia
Genomic MRI – a Public Resource for Studying Sequence Patterns within Genomic DNA

Genomic MRI - a Public Resource for Studying Sequence Patterns within Genomic DNA

DOI:
10.3791/2663-v

•

12:36 min

•

May 09, 2011

•

, ,
1Department of Medicine,University of Toledo Health Science Campus

Capitoli

  • 00:05Titolo
  • 02:04Preparation and Input Sequence Upload
  • 03:50Short-Range Inhomogeneity (SRI) and Random Sequence Generation
  • 06:20Analysis of Mid-Range Inhomogeneity (MRI)
  • 09:38Using Genomic MRI to Identify MRI Patterns
  • 11:00Viewing Saved Data
  • 12:20Conclusion

Summary

Traduzione automatica

Traduzione automatica

We present a public computational web site for the analysis of genomic sequences. It detects DNA sequence patterns with various non-random nucleotide compositions. This resource also generates randomized sequences with diverse levels of complexity.

Tags

Genomic MRISequence PatternsNon-coding Genomic RegionsIntergenic AreasIntronsUntranslated SegmentsMid-Range Inhomogeneity (MRI) RegionsNucleotide CompositionBase EnrichmentNon-B-form DNA StructuresGene Expression RegulationRecombinationGenetic ProcessesFixation BiasSequence InhomogeneityComputational AnalysisMRI PatternsRandomized SequencesNatural Input DNA SequencesNon-coding DNA Examination

Article

Embed

AGGIUNGI ALLA PLAYLIST

Usage Statistics

Video correlati

check_url/it/2663?article_type=v

Isolation of Genomic DNA from Mouse Tails
check_url/it/2663?article_type=v

A Microfluidic Device with Groove Patterns for Studying Cellular Behavior
check_url/it/2663?article_type=v

Large Insert Environmental Genomic Library Production
check_url/it/2663?article_type=v

Extraction of High Molecular Weight Genomic DNA from Soils and Sediments
check_url/it/2663?article_type=v

Generation of RNA/DNA Hybrids in Genomic DNA by Transformation using RNA-containing Oligonucleotides
check_url/it/2663?article_type=v

Competitive Genomic Screens of Barcoded Yeast Libraries
check_url/it/2663?article_type=v

Studying Age-dependent Genomic Instability using the S. cerevisiae Chronological Lifespan Model
check_url/it/2663?article_type=v

En praktisk og Novel metode for å utvinne genomisk DNA fra Blodprøverør Kits for Plasma Protein Preservation
check_url/it/2663?article_type=v

Selektiv Capture av 5-hydroxymethylcytosine fra genomisk DNA
check_url/it/2663?article_type=v

Array Comparative Genomisk Hybridisering (Array CGH) for deteksjon av Genomiske Kopier nummer Varianter

Read Article