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Acquiring Fluorescence Time-lapse Movies of Budding Yeast and Analyzing Single-cell Dynamics using GRAFTS
JoVE Journal
Biologia
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JoVE Journal Biologia
Acquiring Fluorescence Time-lapse Movies of Budding Yeast and Analyzing Single-cell Dynamics using GRAFTS
DOI:

17:01 min

July 18, 2013

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Capitoli

  • 00:05Titolo
  • 01:36Obtain Fluorescent Microscopy Movies of Single Yeast Cells Growing in a Microfluidic Chamber
  • 06:33Format and Segment Data for Tracking Using the FormatData GUI in MATLAB
  • 09:00Track Cells and Lineages through Time with ProcessTimeSeries GUI, and Curate ID and Lineage Assignments
  • 12:33Exporting Data for Analysis
  • 13:35Results: Analysis of Single-cell Time Series
  • 16:22Conclusion

Summary

Traduzione automatica

We present a simple protocol to obtain fluorescence microscopy movies of growing yeast cells, and a GUI-based software package to extract single-cell time series data. The analysis includes automated lineage and division time assignment integrated with visual inspection and manual curation of tracked data.

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