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A Nanopore-Based Genomic Approach to Control Rabies in Low-Income Countries

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Helgenomsekventering til hurtig karakterisering af rabiesvirus ved hjælp af nanoporeteknologi

JoVE Journal
Biologia

This content is Free Access.

JoVE Journal Biologia

Whole Genome Sequencing for Rapid Characterization of Rabies Virus Using Nanopore Technology

Helgenomsekventering til hurtig karakterisering af rabiesvirus ved hjælp af nanoporeteknologi

A Nanopore-Based Genomic Approach to Control Rabies in Low-Income Countries

DOI:

10.3791/65414-v

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02:47 min

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August 18, 2023

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Criselda Bautista², Gurdeep Jaswant^3,4,5, Hollie French⁶, Kathryn Campbell, Rowan Durrant, Robert Gifford⁶, Grace S. N. Kia⁸, Brian Ogoti⁹, Katie Hampson, Kirstyn Brunker⁶

¹School of Biodiversity, One Health & Veterinary Medicine,University of Glasgow, ²Research Institute for Tropical Medicine, ³University of Nairobi, Institute of Tropical and Infectious Diseases, ⁴Tanzania Industrial Research Development Organization, ⁵Ifakara Health Institute, ⁶MRC-University of Glasgow Centre for Virus Research, ⁷Department of Veterinary Public health,Ahmadu Bello University, ⁸African Centre of Excellence for Neglected Tropical Diseases and Forensic Biotechnology,Ahmadu Bello University, ⁹University of Nairobi, Kenya and Center for Epidemiological Modelling and Analysis,University of Nairobi

Tags

Whole Genome Sequencing Rabies Virus Nanopore Technology Pathogen Surveillance Low-resource Settings Bioinformatic Tools Viral Genomic Surveillance Epidemiological Insight Dog-mediated Rabies Wildlife Rabies Sample-to-sequence-to-interpretation Workflow

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