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Chapters
- 00:05Title
- 01:36Obtain Fluorescent Microscopy Movies of Single Yeast Cells Growing in a Microfluidic Chamber
- 06:33Format and Segment Data for Tracking Using the FormatData GUI in MATLAB
- 09:00Track Cells and Lineages through Time with ProcessTimeSeries GUI, and Curate ID and Lineage Assignments
- 12:33Exporting Data for Analysis
- 13:35Results: Analysis of Single-cell Time Series
- 16:22Conclusion
We present a simple protocol to obtain fluorescence microscopy movies of growing yeast cells, and a GUI-based software package to extract single-cell time series data. The analysis includes automated lineage and division time assignment integrated with visual inspection and manual curation of tracked data.
