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אינטגרציה של Wet ותהליכי ספסל יבשים מבצעת אופטימיזציה ממוקד רצף הדור הבא של איכות נמוכה וביופסיות גידול נמוכה כמות
JoVE 신문
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JoVE 신문 의학
Integration of Wet and Dry Bench Processes Optimizes Targeted Next-generation Sequencing of Low-quality and Low-quantity Tumor Biopsies
DOI:

13:24 min

April 11, 2016

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Chapters

  • 00:05Title
  • 01:06DNA Functional Quantification and Quality Control
  • 02:55Library Preparation
  • 05:22Library Purification and Size Selection
  • 06:50Library Quantification
  • 08:21Library Normalization and Sample Pooling
  • 09:23Sequencing
  • 11:09Results: High-depth, Multiplexed Sequencing and Sensitive Analysis of Challenging Cancer Specimens by Targeted NGS
  • 13:01Conclusion

Summary

자동 번역

An integrated system for targeted next-generation sequencing of oncology specimens is described. This cross-platform system is optimized for low-quality and low-quantity tumor biopsies, accommodates low DNA inputs, includes well-characterized multi-variant controls, and features a novel variant caller that is informed by quantitative pre-analytical quality control measures.

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