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1Department of Chemical and Product Safety,German Federal Institute for Risk Assessment (BfR), 2Deutsches Rheuma-Forschungszentrum (DRFZ) Berlin, a Leibniz Institute, 3Charité Universitätsmedizin Berlin, 4Applied Systems Biology,Leibniz Institute for Natural Product Research and Infection Biology Hans Knöll Institute
Chapters
- 00:04Title
- 01:11Reconstruct the 3D Image
- 03:13Transform the 3D Reconstructed Surfaces into 2D Projections
- 04:28Find the Periphery and Calculate the Fourier Components using Fiji
- 05:13Self-Organizing Maps
- 06:53Results: Robustness of SOM Mapping Approach
- 08:32Conclusion
Her, leverer vi en arbejdsproces, der tillader identifikation af sunde og patologiske celler baseret på deres 3-dimensionelle form. Vi beskriver processen med at bruge 2D projektion konturer baseret på 3D overflader til at træne en selvorganiserende kort, der vil give objektive klynger af de undersøgte cellepopulationer.
