Brandi Cantarel

Baylor Institute for Immunology Research, BAYLOR RESEARCH INSTITUTE

Affiliated withBAYLOR RESEARCH INSTITUTE

Research Area

Immunology and Infection

Biography

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JoVE Journal Publications

ArticleTotal : 1	Year
Publication title Cited by 2	2016

Other Publications

Article	Year
Frequent somatic mutations of the transcription factor ATBF1 in human prostate cancer. Nature genetics\| PubMed ID: 15750593	2005
Exploring the relationship between sequence similarity and accurate phylogenetic trees. Molecular biology and evolution\| PubMed ID: 16891377	2006
MAKER: an easy-to-use annotation pipeline designed for emerging model organism genomes. Genome research\| PubMed ID: 18025269	2008
The convergence of carbohydrate active gene repertoires in human gut microbes. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 18806222	2008
The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics. Nucleic acids research\| PubMed ID: 18838391	2009
A core gut microbiome in obese and lean twins. Nature\| PubMed ID: 19043404	2009
Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 19321416	2009
Périgord black truffle genome uncovers evolutionary origins and mechanisms of symbiosis. Nature\| PubMed ID: 20348908	2010
Functional metagenomics to mine the human gut microbiome for dietary fiber catabolic enzymes. Genome research\| PubMed ID: 20841432	2010
Obligate biotrophy features unraveled by the genomic analysis of rust fungi. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 21536894	2011
Sparse distance-based learning for simultaneous multiclass classification and feature selection of metagenomic data. Bioinformatics (Oxford, England)\| PubMed ID: 21984758	2011
Strategies for metagenomic-guided whole-community proteomics of complex microbial environments. PloS one\| PubMed ID: 22132090	2011
Metabolic reconstruction for metagenomic data and its application to the human microbiome. PLoS computational biology\| PubMed ID: 22719234	2012
Complex carbohydrate utilization by the healthy human microbiome. PloS one\| PubMed ID: 22719820	2012
Analysis of the gut microbiota in the old order Amish and its relation to the metabolic syndrome. PloS one\| PubMed ID: 22905200	2012
Integrated metagenomics/metaproteomics reveals human host-microbiota signatures of Crohn's disease. PloS one\| PubMed ID: 23209564	2012
Gene-targeted metagenomic analysis of glucan-branching enzyme gene profiles among human and animal fecal microbiota. The ISME journal\| PubMed ID: 24108330	2014
Inter- and intra-specific pan-genomes of Borrelia burgdorferi sensu lato: genome stability and adaptive radiation. BMC genomics\| PubMed ID: 24112474	2013
Characterization of the Asian Citrus Psyllid Transcriptome. Journal of genomics\| PubMed ID: 24511328	2014
Bacteria, phages and pigs: the effects of in-feed antibiotics on the microbiome at different gut locations. The ISME journal\| PubMed ID: 24522263	2014
BAYSIC: a Bayesian method for combining sets of genome variants with improved specificity and sensitivity. BMC bioinformatics\| PubMed ID: 24725768	2014
Bacteria from diverse habitats colonize and compete in the mouse gut. Cell\| PubMed ID: 25284151	2014
Gut microbiota in multiple sclerosis: possible influence of immunomodulators. Journal of investigative medicine : the official publication of the American Federation for Clinical Research\| PubMed ID: 25775034	2015
Analysis of archived residual newborn screening blood spots after whole genome amplification. BMC genomics\| PubMed ID: 26268606	2015