/
/
High Throughput Yeast Strain Phenotyping with Droplet-Based RNA Sequencing
This content is Free Access.
1Department of Bioengineering and Therapeutic Sciences,University of California San Francisco, 2University of California Berkeley-UCSF Graduate Program in Bioengineering,University of California San Francisco, 3Department of Pharmaceutical Chemistry,University of California San Francisco, 4California Institute for Quantitative Biosciences,University of California San Francisco, 5Chan Zuckerberg Biohub
Capítulos
- 00:04Introduction
- 00:29Yeast Encapsulation in Hydrogels Using Device A
- 01:39Breaking and Washing Hydrogels
- 02:58Yeast Colony Lysis
- 04:04mRNA Capture Using Device B
- 05:27Results: High-Throughput Screening of C. albicans
- 07:24Conclusion
A bottleneck in the ‘design-build-test’ cycle of microbial engineering is the speed at which we can perform functional screens of strains. We describe a high-throughput method for strain screening applied to hundreds to thousands of yeast cells per experiment that utilizes droplet-based RNA sequencing.
