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A Nanopore-Based Genomic Approach to Control Rabies in Low-Income Countries
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Séquençage, appel de base en direct et hors ligne, analyse et interprétation du génome du virus de la rage (RABV)
JoVE Journal
Biology
This content is Free Access.
JoVE Journal Biology
Sequencing, Live and Offline Basecalling, Analysis, and Interpretation of Rabies Virus (RABV) Genome
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Séquençage, appel de base en direct et hors ligne, analyse et interprétation du génome du virus de la rage (RABV)

A Nanopore-Based Genomic Approach to Control Rabies in Low-Income Countries

DOI:
10.3791/200318-v

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05:00 min

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August 18, 2023

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, , , , , , , , ,
1School of Biodiversity, One Health & Veterinary Medicine,University of Glasgow, 2Research Institute for Tropical Medicine, 3University of Nairobi, Institute of Tropical and Infectious Diseases, 4Tanzania Industrial Research Development Organization, 5Ifakara Health Institute, 6MRC-University of Glasgow Centre for Virus Research, 7Department of Veterinary Public health,Ahmadu Bello University, 8African Centre of Excellence for Neglected Tropical Diseases and Forensic Biotechnology,Ahmadu Bello University, 9University of Nairobi, Kenya and Center for Epidemiological Modelling and Analysis,University of Nairobi

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SequencingFlow CellPrimingBasecallingAnalysisInterpretationRabies VirusRABVGenomeRampartArctic RabVMadDogLineage AssignmentConsensus SequencesMapped ReadsCoverageFastqFastA

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