Fengfeng Zhou College of Computer Science and Technology, and Key Laboratory of Symbolic Computation and Knowledge Engineering of Ministry of Education Jilin University Biography Publications Institution JoVE Articles Fengfeng Zhou has not added a biography. If you are Fengfeng Zhou and would like to personalize this page please email our Author Liaison for assistance. Publications MolFeSCue: Enhancing Molecular Property Prediction in Data-Limited and Imbalanced Contexts Using Few-Shot and Contrastive Learning Bioinformatics (Oxford, England). Feb, 2024 | Pubmed ID: 38426310 Computational Characterization of Undifferentially Expressed Genes with Altered Transcription Regulation in Lung Cancer Genes. Dec, 2023 | Pubmed ID: 38136991 Multi-view Progression Diagnosis of Thyroid Cancer by Integrating Platelet Transcriptomes and Blood Routine Tests Computers in Biology and Medicine. Dec, 2023 | Pubmed ID: 37918259 Reconstructing the Cytokine View for the Multi-view Prediction of COVID-19 Mortality BMC Infectious Diseases. Sep, 2023 | Pubmed ID: 37735372 Orchestrating Information Across Tissues Via a Novel Multitask GAT Framework to Improve Quantitative Gene Regulation Relation Modeling for Survival Analysis Briefings in Bioinformatics. Jul, 2023 | Pubmed ID: 37427963 Undifferentially Expressed CXXC5 As a Transcriptionally Regulatory Biomarker of Breast Cancer Advanced Biology. Dec, 2023 | Pubmed ID: 37423953 OCMR: A Comprehensive Framework for Optical Chemical Molecular Recognition Computers in Biology and Medicine. Sep, 2023 | Pubmed ID: 37393787 Transcriptional Dysregulations of Seven Non-Differentially Expressed Genes As Biomarkers of Metastatic Colon Cancer Genes. May, 2023 | Pubmed ID: 37372321 EpiTEAmDNA: Sequence Feature Representation Via Transfer Learning and Ensemble Learning for Identifying Multiple DNA Epigenetic Modification Types Across Species Computers in Biology and Medicine. Jun, 2023 | Pubmed ID: 37196456 Gender-specific Dysregulations of Nondifferentially Expressed Biomarkers of Metastatic Colon Cancer Computational Biology and Chemistry. Jun, 2023 | Pubmed ID: 37058814 Seven Non-differentially Expressed 'dark Biomarkers' Show Transcriptional Dysregulation in Chronic Lymphocytic Leukemia Personalized Medicine. Mar, 2023 | Pubmed ID: 36705049 AcneTyper: An Automatic Diagnosis Method of Dermoscopic Acne Image Via Self-ensemble and Stacking Technology and Health Care : Official Journal of the European Society for Engineering and Medicine. 2023 | Pubmed ID: 36617797 Integration of LncRNAs, Protein-Coding Genes and Pathology Images for Detecting Metastatic Melanoma Genes. Oct, 2022 | Pubmed ID: 36292801 Pan-cancer Identification of the Relationship of Metabolism-related Differentially Expressed Transcription Regulation with Non-differentially Expressed Target Genes Via a Gated Recurrent Unit Network Computers in Biology and Medicine. Sep, 2022 | Pubmed ID: 35878490 Transforming OMIC Features for Classification Using Siamese Convolutional Networks Journal of Bioinformatics and Computational Biology. Jun, 2022 | Pubmed ID: 35818996 Editorial: Biomarker Detection Algorithms and Tools for Medical Imaging or Omics Data Frontiers in Genetics. 2022 | Pubmed ID: 35692838 AcneGrader: An Ensemble Pruning of the Deep Learning Base Models to Grade Acne Skin Research and Technology : Official Journal of International Society for Bioengineering and the Skin (ISBS) [and] International Society for Digital Imaging of Skin (ISDIS) [and] International Society for Skin Imaging (ISSI). Sep, 2022 | Pubmed ID: 35639819 HLAB: Learning the BiLSTM Features from the ProtBert-encoded Proteins for the Class I HLA-peptide Binding Prediction Briefings in Bioinformatics. Sep, 2022 | Pubmed ID: 35514183 A Polygenic Stacking Classifier Revealed the Complicated Platelet Transcriptomic Landscape of Adult Immune Thrombocytopenia Molecular Therapy. Nucleic Acids. Jun, 2022 | Pubmed ID: 35505964 Subtly Altered Topological Asymmetry of Brain Structural Covariance Networks in Autism Spectrum Disorder Across 43 Datasets from the ENIGMA Consortium Molecular Psychiatry. Apr, 2022 | Pubmed ID: 35136228 Describe Molecules by a Heterogeneous Graph Neural Network with Transformer-like Attention for Supervised Property Predictions ACS Omega. Feb, 2022 | Pubmed ID: 35128279 Decreased Iron Ion Concentrations in the Peripheral Blood Correlate with Coronary Atherosclerosis Nutrients. Jan, 2022 | Pubmed ID: 35057500 Author Correction: Altered Structural Brain Asymmetry in Autism Spectrum Disorder in a Study of 54 Datasets Nature Communications. Dec, 2021 | Pubmed ID: 34880244 Zoo: Selecting Transcriptomic and Methylomic Biomarkers by Ensembling Animal-Inspired Swarm Intelligence Feature Selection Algorithms Genes. Nov, 2021 | Pubmed ID: 34828418 Proactive Personality Measurement Using Item Response Theory and Social Media Text Mining Frontiers in Psychology. 2021 | Pubmed ID: 34367029 DiaMole: Mole Detection and Segmentation Software for Mobile Phone Skin Images Journal of Healthcare Engineering. 2021 | Pubmed ID: 34188791 Computational Pan-cancer Characterization of Model-based Quantitative Transcription Regulations Dysregulated in Regional Lymph Node Metastasis Computers in Biology and Medicine. Aug, 2021 | Pubmed ID: 34166881 XGraphBoost: Extracting Graph Neural Network-Based Features for a Better Prediction of Molecular Properties Journal of Chemical Information and Modeling. Jun, 2021 | Pubmed ID: 34009965 EnRank: An Ensemble Method to Detect Pulmonary Hypertension Biomarkers Based on Feature Selection and Machine Learning Models Frontiers in Genetics. 2021 | Pubmed ID: 33986767 Impacts of High-quality Public Data: Special Issue on Integrating Public and In-house Biomedical Data Journal of Bioinformatics and Computational Biology. Jun, 2021 | Pubmed ID: 33971798 RIFS2D: A Two-dimensional Version of a Randomly Restarted Incremental Feature Selection Algorithm with an Application for Detecting Low-ranked Biomarkers Computers in Biology and Medicine. Jun, 2021 | Pubmed ID: 33930763 A Novel Position-Specific Encoding Algorithm (SeqPose) of Nucleotide Sequences and Its Application for Detecting Enhancers International Journal of Molecular Sciences. Mar, 2021 | Pubmed ID: 33802922 Females and Males Show Differences in Early-Stage Transcriptomic Biomarkers of Lung Adenocarcinoma and Lung Squamous Cell Carcinoma Diagnostics (Basel, Switzerland). Feb, 2021 | Pubmed ID: 33669819 Finding Branched Pathways in Metabolic Network Via Atom Group Tracking PLoS Computational Biology. Feb, 2021 | Pubmed ID: 33529200 A Dynamic Recursive Feature Elimination Framework (dRFE) to Further Refine a Set of OMIC Biomarkers Bioinformatics (Oxford, England). Aug, 2021 | Pubmed ID: 33515240 A Machine Learning-Based Investigation of Gender-Specific Prognosis of Lung Cancers Medicina (Kaunas, Lithuania). Jan, 2021 | Pubmed ID: 33499377 Reduced Serum Zinc Ion Concentration Is Associated with Coronary Heart Disease Biological Trace Element Research. Nov, 2021 | Pubmed ID: 33387273 A Comprehensive Comparison of Residue-level Methylation Levels with the Regression-based Gene-level Methylation Estimations by ReGear Briefings in Bioinformatics. Jul, 2021 | Pubmed ID: 33048108 Application of Bayesian Phylogenetic Inference Modelling for Evolutionary Genetic Analysis and Dynamic Changes in 2019-nCoV Briefings in Bioinformatics. Mar, 2021 | Pubmed ID: 32743639 Surgical Resection of Primary Tumor is Associated with Prolonged Survival in Low-grade Pancreatic Neuroendocrine Tumors Clinics and Research in Hepatology and Gastroenterology. Jan, 2021 | Pubmed ID: 32386797 MuscNet, a Weighted Voting Model of Multi-Source Connectivity Networks to Predict Mild Cognitive Impairment Using Resting-State Functional MRI IEEE Access : Practical Innovations, Open Solutions. 2020 | Pubmed ID: 35548102 FeSTwo, a Two-step Feature Selection Algorithm Based on Feature Engineering and Sampling for the Chronological Age Regression Problem Computers in Biology and Medicine. Oct, 2020 | Pubmed ID: 33035960 COVID19XrayNet: A Two-Step Transfer Learning Model for the COVID-19 Detecting Problem Based on a Limited Number of Chest X-Ray Images Interdisciplinary Sciences, Computational Life Sciences. Dec, 2020 | Pubmed ID: 32959234 Severity Detection for the Coronavirus Disease 2019 (COVID-19) Patients Using a Machine Learning Model Based on the Blood and Urine Tests Frontiers in Cell and Developmental Biology. 2020 | Pubmed ID: 32850809 Detection and Independent Validation of Model-Based Quantitative Transcriptional Regulation Relationships Altered in Lung Cancers Frontiers in Bioengineering and Biotechnology. 2020 | Pubmed ID: 32656193 Selection of Features for Patient-independent Detection of Seizure Events Using Scalp EEG Signals Computers in Biology and Medicine. Apr, 2020 | Pubmed ID: 32339116 Detection and Comparative Analysis of Methylomic Biomarkers of Rheumatoid Arthritis Frontiers in Genetics. 2020 | Pubmed ID: 32292416 Dimension Reduction and Clustering Models for Single-Cell RNA Sequencing Data: A Comparative Study International Journal of Molecular Sciences. Mar, 2020 | Pubmed ID: 32235704 AgeGuess, a Methylomic Prediction Model for Human Ages Frontiers in Bioengineering and Biotechnology. 2020 | Pubmed ID: 32211384 Feature Selection May Improve Deep Neural Networks for the Bioinformatics Problems Bioinformatics (Oxford, England). Mar, 2020 | Pubmed ID: 31591638 SefOri: Selecting the Best-engineered Sequence Features to Predict DNA Replication Origins Bioinformatics (Oxford, England). Jan, 2020 | Pubmed ID: 31218360 Epigenetic Profiles Capturing Breast Cancer Stemness for Triple Negative Breast Cancer Control Epigenomics. Dec, 2019 | Pubmed ID: 31729259 Altered Structural Brain Asymmetry in Autism Spectrum Disorder in a Study of 54 Datasets Nature Communications. Oct, 2019 | Pubmed ID: 31673008 BioDog, Biomarker Detection for Improving Identification Power of Breast Cancer Histologic Grade in Methylomics Epigenomics. Nov, 2019 | Pubmed ID: 31625763 Diagnosis of Breast Hyperplasia and Evaluation of RuXian-I Based on Metabolomics Deep Belief Networks International Journal of Molecular Sciences. May, 2019 | Pubmed ID: 31141969 Detecting Methylomic Biomarkers of Pediatric Autism in the Peripheral Blood Leukocytes Interdisciplinary Sciences, Computational Life Sciences. Jun, 2019 | Pubmed ID: 30993567 Age Is Important for the Early-Stage Detection of Breast Cancer on Both Transcriptomic and Methylomic Biomarkers Frontiers in Genetics. 2019 | Pubmed ID: 30984234 Using Machine Learning to Measure Relatedness Between Genes: A Multi-Features Model Scientific Reports. Mar, 2019 | Pubmed ID: 30862804 An Accurate Regression of Developmental Stages for Breast Cancer Based on Transcriptomic Biomarkers Biomarkers in Medicine. Jan, 2019 | Pubmed ID: 30484698 PyHIVE, a Health-related Image Visualization and Engineering System Using Python BMC Bioinformatics. Nov, 2018 | Pubmed ID: 30477418 Improving Prediction of Self-interacting Proteins Using Stacked Sparse Auto-Encoder with PSSM Profiles International Journal of Biological Sciences. 2018 | Pubmed ID: 29989064 TriZ-a Rotation-tolerant Image Feature and Its Application in Endoscope-based Disease Diagnosis Computers in Biology and Medicine. Aug, 2018 | Pubmed ID: 29936284 Author Correction: Multi-label Deep Learning for Gene Function Annotation in Cancer Pathways Scientific Reports. Jun, 2018 | Pubmed ID: 29875368 Integration of 24 Feature Types to Accurately Detect and Predict Seizures Using Scalp EEG Signals Sensors (Basel, Switzerland). Apr, 2018 | Pubmed ID: 29710763 Gender Specificity Improves the Early-stage Detection of Clear Cell Renal Cell Carcinoma Based on Methylomic Biomarkers Biomarkers in Medicine. Jun, 2018 | Pubmed ID: 29707986 Publisher Correction: Multiple Similarly Effective Solutions Exist for Biomedical Feature Selection and Classification Problems Scientific Reports. Mar, 2018 | Pubmed ID: 29511231 Proteomic Biomarkers for Lung Cancer Progression Biomarkers in Medicine. Mar, 2018 | Pubmed ID: 29424557 An OMIC Biomarker Detection Algorithm TriVote and Its Application in Methylomic Biomarker Detection Epigenomics. Apr, 2018 | Pubmed ID: 29347830 Author Correction: Multiple Similarly Effective Solutions Exist for Biomedical Feature Selection and Classification Problems Scientific Reports. Jan, 2018 | Pubmed ID: 29323245 Multi-label Deep Learning for Gene Function Annotation in Cancer Pathways Scientific Reports. 01, 2018 | Pubmed ID: 29321535 Cortical and Subcortical Brain Morphometry Differences Between Patients With Autism Spectrum Disorder and Healthy Individuals Across the Lifespan: Results From the ENIGMA ASD Working Group The American Journal of Psychiatry. Apr, 2018 | Pubmed ID: 29145754 RIFS: a Randomly Restarted Incremental Feature Selection Algorithm Scientific Reports. Oct, 2017 | Pubmed ID: 29026108 Multiple Similarly-well Solutions Exist for Biomedical Feature Selection and Classification Problems Scientific Reports. Oct, 2017 | Pubmed ID: 28993656 MUSTv2: An Improved De Novo Detection Program for Recently Active Miniature Inverted Repeat Transposable Elements (MITEs) Journal of Integrative Bioinformatics. Aug, 2017 | Pubmed ID: 28796642 Gly-PseAAC: Identifying Protein Lysine Glycation Through Sequences Gene. Feb, 2017 | Pubmed ID: 27845204 Rectified-Linear-Unit-Based Deep Learning for Biomedical Multi-label Data Interdisciplinary Sciences, Computational Life Sciences. Sep, 2017 | Pubmed ID: 27837428 Machine Learning Based Detection of Age-related Macular Degeneration (AMD) and Diabetic Macular Edema (DME) from Optical Coherence Tomography (OCT) Images Biomedical Optics Express. Dec, 2016 | Pubmed ID: 28018716 CRISPRdigger: Detecting CRISPRs with Better Direct Repeat Annotations Scientific Reports. 09, 2016 | Pubmed ID: 27596864 CD3D and PRKCQ Work Together to Discriminate Between B-cell and T-cell Acute Lymphoblastic Leukemia Computers in Biology and Medicine. 10, 2016 | Pubmed ID: 27494091 A Comprehensive Curation Shows the Dynamic Evolutionary Patterns of Prokaryotic CRISPRs BioMed Research International. 2016 | Pubmed ID: 27195295 McTwo: a Two-step Feature Selection Algorithm Based on Maximal Information Coefficient BMC Bioinformatics. Mar, 2016 | Pubmed ID: 27006077 Personalized Clinical Data Screening: Special Issue on Health Informatics Computers in Biology and Medicine. Jun, 2015 | Pubmed ID: 25921697 A Novel Electrocardiogram Parameterization Algorithm and Its Application in Myocardial Infarction Detection Computers in Biology and Medicine. Jun, 2015 | Pubmed ID: 25201457 Genome-wide Screening of Pathogenicity Islands in Mycobacterium Tuberculosis Based on the Genomic Barcode Visualization Molecular Biology Reports. Sep, 2014 | Pubmed ID: 25108673 A Novel Molecular Typing Method of Mycobacteria Based on DNA Barcoding Visualization Journal of Clinical Bioinformatics. Feb, 2014 | Pubmed ID: 24555538 Gene Expression Profile Based Classification Models of Psoriasis Genomics. Jan, 2014 | Pubmed ID: 24239985 Normalizing Electrocardiograms of Both Healthy Persons and Cardiovascular Disease Patients for Biometric Authentication PloS One. 2013 | Pubmed ID: 23977063 QServer: a Biclustering Server for Prediction and Assessment of Co-expressed Gene Clusters PloS One. 2012 | Pubmed ID: 22403692 Computational Prediction and Experimental Validation of Novel Markers for Detection of STEC O157:H7 World Journal of Gastroenterology. Apr, 2011 | Pubmed ID: 21528067 CBar: a Computer Program to Distinguish Plasmid-derived from Chromosome-derived Sequence Fragments in Metagenomics Data Bioinformatics (Oxford, England). Aug, 2010 | Pubmed ID: 20538725 De Novo Computational Prediction of Non-coding RNA Genes in Prokaryotic Genomes Bioinformatics (Oxford, England). Nov, 2009 | Pubmed ID: 19744996 Author Spotlight: Impact of Intergenic Interactions on Disease-Identifying Dark Biomarkers Kewei Li1, Yusi Fan1, Yaqing Liu1, Hongmei Liu2, Gongyou Zhang2, Meiyu Duan1, Lan Huang1, Fengfeng Zhou1 1College of Computer Science and Technology, and Key Laboratory of Symbolic Computation and Knowledge Engineering of Ministry of Education, Jilin University, 2School of Biology and Engineering, Guizhou Medical University JoVE 66030 Biology בחירת קבוצות משנה מרובים סמן עם הופעות איבחונים יעיל באופן דומה Xin Feng1, Shaofei Wang1, Quewang Liu1, Han Li2, Jiamei Liu2, Cheng Xu2, Weifeng Yang2, Yayun Shu2, Weiwei Zheng1, Bingxin Yu3, Mingran Qi4, Wenyang Zhou1, Fengfeng Zhou1 1College of Computer Science and Technology, and Key Laboratory of Symbolic Computation and Knowledge Engineering of Ministry of Education, Jilin University, 2College of Software, Jilin University, 3Ultrasonography Department, China-Japan Union Hospital of Jilin University, 4Department of Pathogenobiology, College of Basic Medical Science, Jilin University JoVE 57738 Cancer Research
Author Spotlight: Impact of Intergenic Interactions on Disease-Identifying Dark Biomarkers Kewei Li1, Yusi Fan1, Yaqing Liu1, Hongmei Liu2, Gongyou Zhang2, Meiyu Duan1, Lan Huang1, Fengfeng Zhou1 1College of Computer Science and Technology, and Key Laboratory of Symbolic Computation and Knowledge Engineering of Ministry of Education, Jilin University, 2School of Biology and Engineering, Guizhou Medical University JoVE 66030 Biology
בחירת קבוצות משנה מרובים סמן עם הופעות איבחונים יעיל באופן דומה Xin Feng1, Shaofei Wang1, Quewang Liu1, Han Li2, Jiamei Liu2, Cheng Xu2, Weifeng Yang2, Yayun Shu2, Weiwei Zheng1, Bingxin Yu3, Mingran Qi4, Wenyang Zhou1, Fengfeng Zhou1 1College of Computer Science and Technology, and Key Laboratory of Symbolic Computation and Knowledge Engineering of Ministry of Education, Jilin University, 2College of Software, Jilin University, 3Ultrasonography Department, China-Japan Union Hospital of Jilin University, 4Department of Pathogenobiology, College of Basic Medical Science, Jilin University JoVE 57738 Cancer Research