Gianluca De Bellis Institute for Biomedical Technologies CNR Biography Publications Institution JoVE Articles Gianluca De Bellis has not added a biography. If you are Gianluca De Bellis and would like to personalize this page please email our Author Liaison for assistance. Publications WoPPER: Web Server for Position Related Data Analysis of Gene Expression in Prokaryotes Nucleic Acids Research. Apr, 2017 | Pubmed ID: 28460063 Comprehensive Mapping of the Helicobacter Pylori NikR Regulon Provides New Insights in Bacterial Nickel Responses Scientific Reports. Apr, 2017 | Pubmed ID: 28393877 Complete Mitochondrial Sequences from Mesolithic Sardinia Scientific Reports. Mar, 2017 | Pubmed ID: 28256601 Insight into the Essential Role of the Helicobacter Pylori HP1043 Orphan Response Regulator: Genome-wide Identification and Characterization of the DNA-binding Sites Scientific Reports. Jan, 2017 | Pubmed ID: 28112213 Corrigendum: A Unique Tryptophan C-Prenyltransferase from the Kawaguchipeptin Biosynthetic Pathway Angewandte Chemie (International Ed. in English). Jan, 2017 | Pubmed ID: 28045232 T Cell Neoepitope Discovery in Colorectal Cancer by High Throughput Profiling of Somatic Mutations in Expressed Genes Gut. Mar, 2017 | Pubmed ID: 26681737 Next Generation Sequencing of Pooled Samples: Guideline for Variants' Filtering Scientific Reports. Sep, 2016 | Pubmed ID: 27670852 Transcriptional, Epigenetic and Retroviral Signatures Identify Regulatory Regions Involved in Hematopoietic Lineage Commitment Scientific Reports. Apr, 2016 | Pubmed ID: 27095295 ICESpy009, a Conjugative Genetic Element Carrying Mef(E) in Streptococcus Pyogenes Antimicrobial Agents and Chemotherapy. Jul, 2016 | Pubmed ID: 27067338 Dynamic Transcriptional and Epigenetic Regulation of Human Epidermal Keratinocyte Differentiation Stem Cell Reports. Apr, 2016 | Pubmed ID: 27050947 A Unique Tryptophan C-Prenyltransferase from the Kawaguchipeptin Biosynthetic Pathway Angewandte Chemie (International Ed. in English). Mar, 2016 | Pubmed ID: 26846478 Identification of Novel Proteins Binding the AU-rich Element of α-prothymosin MRNA Through the Selection of Open Reading Frames (RIDome) RNA Biology. 2015 | Pubmed ID: 26512911 Antifungal Activity Improved by Coproduction of Cyclodextrins and Anabaenolysins in Cyanobacteria Proceedings of the National Academy of Sciences of the United States of America. Nov, 2015 | Pubmed ID: 26474830 High-throughput Genetic Characterization of a Cohort of Brugada Syndrome Patients Human Molecular Genetics. Oct, 2015 | Pubmed ID: 26220970 A Genomic, Transcriptomic and Proteomic Look at the GE2270 Producer Planobispora Rosea, an Uncommon Actinomycete PloS One. 2015 | Pubmed ID: 26207753 Whole-exome Sequencing of Primary Plasma Cell Leukemia Discloses Heterogeneous Mutational Patterns Oncotarget. Jul, 2015 | Pubmed ID: 26046463 Characterization of the Escherichia Coli σ(S) Core Regulon by Chromatin Immunoprecipitation-sequencing (ChIP-seq) Analysis Scientific Reports. May, 2015 | Pubmed ID: 26020590 Genome-Wide Definition of Promoter and Enhancer Usage During Neural Induction of Human Embryonic Stem Cells PloS One. 2015 | Pubmed ID: 25978676 The Neanderthal in the Karst: First Dating, Morphometric, and Paleogenetic Data on the Fossil Skeleton from Altamura (Italy) Journal of Human Evolution. May, 2015 | Pubmed ID: 25805042 The Germline of the Malaria Mosquito Produces Abundant MiRNAs, Endo-siRNAs, PiRNAs and 29-nt Small RNAs BMC Genomics. Feb, 2015 | Pubmed ID: 25766668 Behçet's Syndrome Patients Exhibit Specific Microbiome Signature Autoimmunity Reviews. Apr, 2015 | Pubmed ID: 25435420 Three Novel Fusion Transcripts of the Paired Box 5 Gene in B-cell Precursor Acute Lymphoblastic Leukemia Haematologica. Jan, 2015 | Pubmed ID: 25304615 Comparative Genomics Revealed Key Molecular Targets to Rapidly Convert a Reference Rifamycin-producing Bacterial Strain into an Overproducer by Genetic Engineering Metabolic Engineering. Nov, 2014 | Pubmed ID: 25149266 Genomic Organization and Evolution of Double Minutes/homogeneously Staining Regions with MYC Amplification in Human Cancer Nucleic Acids Research. Aug, 2014 | Pubmed ID: 25034695 Enly: Improving Draft Genomes Through Reads Recycling Journal of Genomics. 2014 | Pubmed ID: 25031660 Positioning the Red Deer (Cervus Elaphus) Hunted by the Tyrolean Iceman into a Mitochondrial DNA Phylogeny PloS One. 2014 | Pubmed ID: 24988290 Genome-wide Analysis of Alpharetroviral Integration in Human Hematopoietic Stem/progenitor Cells Genes. May, 2014 | Pubmed ID: 24840152 Gut Microbiome of the Hadza Hunter-gatherers Nature Communications. Apr, 2014 | Pubmed ID: 24736369 Gene and Protein Expression in Response to Different Growth Temperatures and Oxygen Availability in Burkholderia Thailandensis PloS One. 2014 | Pubmed ID: 24671187 Small Noncoding RNAs in Cells Transformed by Human T-cell Leukemia Virus Type 1: a Role for a TRNA Fragment As a Primer for Reverse Transcriptase Journal of Virology. Apr, 2014 | Pubmed ID: 24403582 The Enterocyte-associated Intestinal Microbiota of Breast-fed Infants and Adults Responds Differently to a TNF-α-mediated Pro-inflammatory Stimulus PloS One. 2013 | Pubmed ID: 24303069 EXCAVATOR: Detecting Copy Number Variants from Whole-exome Sequencing Data Genome Biology. 2013 | Pubmed ID: 24172663 Whole Genome SNP Genotyping and Exome Sequencing Reveal Novel Genetic Variants and Putative Causative Genes in Congenital Hyperinsulinism PloS One. 2013 | Pubmed ID: 23869231 Comprehensive Genomic Characterization of Cutaneous Malignant Melanoma Cell Lines Derived from Metastatic Lesions by Whole-exome Sequencing and SNP Array Profiling PloS One. 2013 | Pubmed ID: 23704925 Profiling Celiac Disease Antibody Repertoire Clinical Immunology (Orlando, Fla.). Jul, 2013 | Pubmed ID: 23685219 Acquired Copy-neutral Loss of Heterozygosity of Chromosome 1p As a Molecular Event Associated with Marrow Fibrosis in MPL-mutated Myeloproliferative Neoplasms Blood. May, 2013 | Pubmed ID: 23575445 The Genome Sequence of the Hydrocarbon-degrading Acinetobacter Venetianus VE-C3 Research in Microbiology. Jun, 2013 | Pubmed ID: 23528645 Origins and Evolution of the Etruscans' MtDNA PloS One. 2013 | Pubmed ID: 23405165 Deletion of the LTR Enhancer/promoter Has No Impact on the Integration Profile of MLV Vectors in Human Hematopoietic Progenitors PloS One. 2013 | Pubmed ID: 23383272 An Efficient RRNA Removal Method for RNA Sequencing in GC-rich Bacteria Microbial Informatics and Experimentation. Jan, 2013 | Pubmed ID: 23294941 Ancient DNA Studies: New Perspectives on Old Samples Genetics, Selection, Evolution : GSE. Jul, 2012 | Pubmed ID: 22697611 Unbalance of Intestinal Microbiota in Atopic Children BMC Microbiology. Jun, 2012 | Pubmed ID: 22672413 Specific Inactivation of Two Immunomodulatory SIGLEC Genes During Human Evolution Proceedings of the National Academy of Sciences of the United States of America. Jun, 2012 | Pubmed ID: 22665810 Diversity of Bifidobacteria Within the Infant Gut Microbiota PloS One. 2012 | Pubmed ID: 22606315 Phylogenetic Position of a Copper Age Sheep (Ovis Aries) Mitochondrial DNA PloS One. 2012 | Pubmed ID: 22457789 Comparative Genomics and Transcriptional Profiles of Saccharopolyspora Erythraea NRRL 2338 and a Classically Improved Erythromycin Over-producing Strain Microbial Cell Factories. Mar, 2012 | Pubmed ID: 22401291 Detection and Characterization of Pathogenic Vibrios in Shellfish by a Ligation Detection Reaction-Universal Array Approach International Journal of Food Microbiology. Feb, 2012 | Pubmed ID: 22177227 Modulation of MicroRNA Expression in Human T-cell Development: Targeting of NOTCH3 by MiR-150 Blood. Jun, 2011 | Pubmed ID: 21551231 In Vitro Transcription Profiling of the σS Subunit of Bacterial RNA Polymerase: Re-definition of the σS Regulon and Identification of σS-specific Promoter Sequence Elements Nucleic Acids Research. Jul, 2011 | Pubmed ID: 21398637 Complete Genome Sequence of a Serotype 11A, ST62 Streptococcus Pneumoniae Invasive Isolate BMC Microbiology. Feb, 2011 | Pubmed ID: 21284853 The Complete Mitochondrial Genome of an 11,450-year-old Aurochsen (Bos Primigenius) from Central Italy BMC Evolutionary Biology. Jan, 2011 | Pubmed ID: 21281509 Deep Sequencing Reveals Double Mutations in Cis of MPL Exon 10 in Myeloproliferative Neoplasms Haematologica. Apr, 2011 | Pubmed ID: 21228032 High-definition Mapping of Retroviral Integration Sites Identifies Active Regulatory Elements in Human Multipotent Hematopoietic Progenitors Blood. Dec, 2010 | Pubmed ID: 20864581 Reliable Resequencing of the Human Dystrophin Locus by Universal Long Polymerase Chain Reaction and Massive Pyrosequencing Analytical Biochemistry. Nov, 2010 | Pubmed ID: 20670611 The Microcephalin Ancestral Allele in a Neanderthal Individual PloS One. May, 2010 | Pubmed ID: 20498832 High Taxonomic Level Fingerprint of the Human Intestinal Microbiota by Ligase Detection Reaction--universal Array Approach BMC Microbiology. Apr, 2010 | Pubmed ID: 20398430 Rapid Interactome Profiling by Massive Sequencing Nucleic Acids Research. May, 2010 | Pubmed ID: 20144949 Characterization of Nucleotide Misincorporation Patterns in the Iceman's Mitochondrial DNA PloS One. Jan, 2010 | Pubmed ID: 20072618 ORMA: a Tool for Identification of Species-specific Variations in 16S RRNA Gene and Oligonucleotides Design Nucleic Acids Research. Sep, 2009 | Pubmed ID: 19531738 A Transcriptional Sketch of a Primary Human Breast Cancer by 454 Deep Sequencing BMC Genomics. Apr, 2009 | Pubmed ID: 19379481 Phenotypes and Gene Expression Profiles of Saccharopolyspora Erythraea Rifampicin-resistant (rif) Mutants Affected in Erythromycin Production Microbial Cell Factories. Mar, 2009 | Pubmed ID: 19331655 High-throughput Sequencing Allows the Identification of Binding Molecules Isolated from DNA-encoded Chemical Libraries Proceedings of the National Academy of Sciences of the United States of America. Nov, 2008 | Pubmed ID: 19001273 Complete Mitochondrial Genome Sequence of the Tyrolean Iceman Current Biology : CB. Nov, 2008 | Pubmed ID: 18976917 Evaluation of Human Gene Variant Detection in Amplicon Pools by the GS-FLX Parallel Pyrosequencer BMC Genomics. Oct, 2008 | Pubmed ID: 18842124 Methods for Detection of GMOs in Food and Feed Analytical and Bioanalytical Chemistry. Oct, 2008 | Pubmed ID: 18726090 Whole-genome Pyrosequencing of an Epidemic Multidrug-resistant Acinetobacter Baumannii Strain Belonging to the European Clone II Group Antimicrobial Agents and Chemotherapy. Jul, 2008 | Pubmed ID: 18411315 Anchoring of Unmodified Oligonucleotides on a Chitosan-based Array: Applications to Genotyping and Gene Expression Analytical Biochemistry. May, 2008 | Pubmed ID: 18298938 Identification of Hepatotoxin-producing Cyanobacteria by DNA-chip Environmental Microbiology. Mar, 2008 | Pubmed ID: 18190512 Complete Gene Expression Profiling of Saccharopolyspora Erythraea Using GeneChip DNA Microarrays Microbial Cell Factories. Nov, 2007 | Pubmed ID: 18039355 Data Handling Strategies for High Throughput Pyrosequencers BMC Bioinformatics. Mar, 2007 | Pubmed ID: 17430567 Olive Variety Identification by Ligation Detection Reaction in a Universal Array Format Journal of Biotechnology. May, 2007 | Pubmed ID: 17350706 Application of the Taguchi Method to the Analysis of the Deposition Step in Microarray Production IEEE Transactions on Nanobioscience. Sep, 2006 | Pubmed ID: 16999241 Transcriptome Amplification Methods in Gene Expression Profiling Expert Review of Molecular Diagnostics. May, 2006 | Pubmed ID: 16706747 Strategies for Comparing Gene Expression Profiles from Different Microarray Platforms: Application to a Case-control Experiment Analytical Biochemistry. Jun, 2006 | Pubmed ID: 16624241 Polymerase Chain Reaction of 2-kb Cyanobacterial Gene and Human Anti-alpha1-chymotrypsin Gene from Genomic DNA on the In-Check Single-use Microfabricated Silicon Chip Analytical Biochemistry. Jun, 2006 | Pubmed ID: 16620755 A Structured Chitosan-based Platform for Biomolecule Attachment to Solid Surfaces: Application to DNA Microarray Preparation Bioconjugate Chemistry. Mar-Apr, 2006 | Pubmed ID: 16536468 A Microarray Platform for Parallel Detection of Five Transgenic Events in Foods: a Combined Polymerase Chain Reaction-ligation Detection Reaction-universal Array Method Journal of Agricultural and Food Chemistry. Feb, 2005 | Pubmed ID: 15712997 Development of a Universal Microarray Based on the Ligation Detection Reaction and 16S Rrna Gene Polymorphism to Target Diversity of Cyanobacteria Applied and Environmental Microbiology. Dec, 2004 | Pubmed ID: 15574913 Polymorphism Analysis Within the HLA-A Locus by Universal Oligonucleotide Array Human Mutation. Nov, 2004 | Pubmed ID: 15459953 Detection of Genetically Modified Soybean Using Peptide Nucleic Acids (PNAs) and Microarray Technology Journal of Agricultural and Food Chemistry. Jul, 2004 | Pubmed ID: 15237963 Detection and Quantitation of Genetically Modified Maize (Bt-176 Transgenic Maize) by Applying Ligation Detection Reaction and Universal Array Technology Journal of Agricultural and Food Chemistry. Mar, 2004 | Pubmed ID: 14995096 Transferrin C2 Variant Does Confer a Risk for Alzheimer's Disease in Caucasians Journal of Alzheimer's Disease : JAD. Dec, 2003 | Pubmed ID: 14757931 Apolipoprotein E and Transferrin Genotyping by Ligation Detection Reaction and Universal Array Clinical Chemistry. Sep, 2003 | Pubmed ID: 12928241 Detection of HLA Polymorphisms by Ligase Detection Reaction and a Universal Array Format: a Pilot Study for Low Resolution Genotyping Human Immunology. Jan, 2003 | Pubmed ID: 12507828 Two Efficient Polymeric Chemical Platforms for Oligonucleotide Microarray Preparation Nucleosides, Nucleotides & Nucleic Acids. 2002 | Pubmed ID: 12484451 Bacterial Discrimination by Means of a Universal Array Approach Mediated by LDR (ligase Detection Reaction) BMC Microbiology. Sep, 2002 | Pubmed ID: 12243651 Investigation of the Multiple Anchors Approach in Oligonucleotide Microarray Preparation Using Linear and Stem-loop Structured Probes Nucleic Acids Research. Apr, 2002 | Pubmed ID: 11937642 Varredura Retroviral: Mapeamento de sites de integração MLV para definir regiões reguladoras específicas de células Oriana Romano1,2, Ingrid Cifola3, Valentina Poletti4, Marco Severgnini3, Clelia Peano3, Gianluca De Bellis3, Fulvio Mavilio1,4, Annarita Miccio1,2,4,5 1Center for Genome Research, Department of Life Sciences, University of Modena and Reggio Emilia, 2Laboratory of Chromatin and Gene Regulation During Development, Imagine Institute, 3Institute for Biomedical Technologies, CNR, 4Généthon, 5Sorbonne Paris Cité - Université Paris Descartes JoVE 55919 Genetics
Varredura Retroviral: Mapeamento de sites de integração MLV para definir regiões reguladoras específicas de células Oriana Romano1,2, Ingrid Cifola3, Valentina Poletti4, Marco Severgnini3, Clelia Peano3, Gianluca De Bellis3, Fulvio Mavilio1,4, Annarita Miccio1,2,4,5 1Center for Genome Research, Department of Life Sciences, University of Modena and Reggio Emilia, 2Laboratory of Chromatin and Gene Regulation During Development, Imagine Institute, 3Institute for Biomedical Technologies, CNR, 4Généthon, 5Sorbonne Paris Cité - Université Paris Descartes JoVE 55919 Genetics