Jyoti S. Choudhary Proteomic Mass Spectrometry Wellcome Trust Sanger Institute, Wellcome Genome Campus Biography Publications Institution JoVE Articles Jyoti S. Choudhary has not added a biography. If you are Jyoti S. Choudhary and would like to personalize this page please email our Author Liaison for assistance. Publications Delineating the HMGB1 and HMGB2 Interactome in Prostate and Ovary Epithelial Cells and Its Relationship with Cancer Oncotarget. Apr, 2018 | Pubmed ID: 29721183 Sub-minute Phosphoregulation of Cell Cycle Systems During Plasmodium Gamete Formation Cell Reports. Nov, 2017 | Pubmed ID: 29141230 Genomic Determinants of Protein Abundance Variation in Colorectal Cancer Cells Cell Reports. Aug, 2017 | Pubmed ID: 28854368 Myst2/Kat7 Histone Acetyltransferase Interaction Proteomics Reveals Tumour-suppressor Niam As a Novel Binding Partner in Embryonic Stem Cells Scientific Reports. Aug, 2017 | Pubmed ID: 28811661 Evolution of Complexity in the Zebrafish Synapse Proteome Nature Communications. Mar, 2017 | Pubmed ID: 28252024 Flexible Data Analysis Pipeline for High-Confidence Proteogenomics Journal of Proteome Research. Dec, 2016 | Pubmed ID: 27786492 OpenMS: a Flexible Open-source Software Platform for Mass Spectrometry Data Analysis Nature Methods. Aug, 2016 | Pubmed ID: 27575624 DecoyPyrat: Fast Non-redundant Hybrid Decoy Sequence Generation for Large Scale Proteomics Journal of Proteomics & Bioinformatics. Jun, 2016 | Pubmed ID: 27418748 Improving GENCODE Reference Gene Annotation Using a High-stringency Proteogenomics Workflow Nature Communications. Jun, 2016 | Pubmed ID: 27250503 Interferon-driven Alterations of the Host's Amino Acid Metabolism in the Pathogenesis of Typhoid Fever The Journal of Experimental Medicine. May, 2016 | Pubmed ID: 27217537 Study of Plasmodium Falciparum DHHC Palmitoyl Transferases Identifies a Role for PfDHHC9 in Gametocytogenesis Cellular Microbiology. Nov, 2016 | Pubmed ID: 27060339 Quantitative Proteomic Analysis of Shigella Flexneri and Shigella Sonnei Generalized Modules for Membrane Antigens (GMMA) Reveals Highly Pure Preparations International Journal of Medical Microbiology : IJMM. Feb, 2016 | Pubmed ID: 26746581 Cyclic DiGMP Regulates Production of Sortase Substrates of Clostridium Difficile and Their Surface Exposure Through ZmpI Protease-mediated Cleavage The Journal of Biological Chemistry. Oct, 2015 | Pubmed ID: 26283789 Palmitoylation and Palmitoyl-transferases in Plasmodium Parasites Biochemical Society Transactions. Apr, 2015 | Pubmed ID: 25849924 Human Post-mortem Synapse Proteome Integrity Screening for Proteomic Studies of Postsynaptic Complexes Molecular Brain. Nov, 2014 | Pubmed ID: 25429717 A New Method to Determine in Vivo Interactomes Reveals Binding of the Legionella Pneumophila Effector PieE to Multiple Rab GTPases MBio. Aug, 2014 | Pubmed ID: 25118235 Confident and Sensitive Phosphoproteomics Using Combinations of Collision Induced Dissociation and Electron Transfer Dissociation Journal of Proteomics. May, 2014 | Pubmed ID: 24657495 Functional Genomics Reveals That Clostridium Difficile Spo0A Coordinates Sporulation, Virulence and Metabolism BMC Genomics. Feb, 2014 | Pubmed ID: 24568651 The OMSSAPercolator: an Automated Tool to Validate OMSSA Results Proteomics. May, 2014 | Pubmed ID: 24504981 A Polygenic Burden of Rare Disruptive Mutations in Schizophrenia Nature. Feb, 2014 | Pubmed ID: 24463508 Comparative Study of Human and Mouse Postsynaptic Proteomes Finds High Compositional Conservation and Abundance Differences for Key Synaptic Proteins PloS One. 2012 | Pubmed ID: 23071613 Analysis of Protein Palmitoylation Reveals a Pervasive Role in Plasmodium Development and Pathogenesis Cell Host & Microbe. Aug, 2012 | Pubmed ID: 22901544 A Plasmodium Calcium-dependent Protein Kinase Controls Zygote Development and Transmission by Translationally Activating Repressed MRNAs Cell Host & Microbe. Jul, 2012 | Pubmed ID: 22817984 Enhanced Peptide Identification by Electron Transfer Dissociation Using an Improved Mascot Percolator Molecular & Cellular Proteomics : MCP. Aug, 2012 | Pubmed ID: 22493177 Assignment of Protein Interactions from Affinity Purification/mass Spectrometry Data Journal of Proteome Research. Mar, 2012 | Pubmed ID: 22283744 Coordinating Cell Cycle Progression Via Cyclin Specificity Cell Cycle (Georgetown, Tex.). Dec, 2011 | Pubmed ID: 22156915 APC15 Drives the Turnover of MCC-CDC20 to Make the Spindle Assembly Checkpoint Responsive to Kinetochore Attachment Nature Cell Biology. Sep, 2011 | Pubmed ID: 21926987 Quantitative Proteomics Reveals the Basis for the Biochemical Specificity of the Cell-cycle Machinery Molecular Cell. Aug, 2011 | Pubmed ID: 21816347 Citrobacter Rodentium is an Unstable Pathogen Showing Evidence of Significant Genomic Flux PLoS Pathogens. Apr, 2011 | Pubmed ID: 21490962 Shotgun Proteomics Aids Discovery of Novel Protein-coding Genes, Alternative Splicing, and "resurrected" Pseudogenes in the Mouse Genome Genome Research. May, 2011 | Pubmed ID: 21460061 Characterization of the Proteome, Diseases and Evolution of the Human Postsynaptic Density Nature Neuroscience. Jan, 2011 | Pubmed ID: 21170055 Prmt5 is Essential for Early Mouse Development and Acts in the Cytoplasm to Maintain ES Cell Pluripotency Genes & Development. Dec, 2010 | Pubmed ID: 21159818 Targeted Tandem Affinity Purification of PSD-95 Recovers Core Postsynaptic Complexes and Schizophrenia Susceptibility Proteins Molecular Systems Biology. 2009 | Pubmed ID: 19455133 Neurotransmitters Drive Combinatorial Multistate Postsynaptic Density Networks Science Signaling. Apr, 2009 | Pubmed ID: 19401593 Mapping Multiprotein Complexes by Affinity Purification and Mass Spectrometry Current Opinion in Biotechnology. Aug, 2008 | Pubmed ID: 18598764 Evolutionary Expansion and Anatomical Specialization of Synapse Proteome Complexity Nature Neuroscience. Jul, 2008 | Pubmed ID: 18536710 Phosphoproteomic Analysis of the Mouse Brain Cytosol Reveals a Predominance of Protein Phosphorylation in Regions of Intrinsic Sequence Disorder Molecular & Cellular Proteomics : MCP. Jul, 2008 | Pubmed ID: 18388127 Analysis of Protein Phosphorylation on a Proteome-scale Proteomics. Aug, 2007 | Pubmed ID: 17703509 Molecular Characterization and Comparison of the Components and Multiprotein Complexes in the Postsynaptic Proteome Journal of Neurochemistry. Apr, 2006 | Pubmed ID: 16635246 Robust Enrichment of Phosphorylated Species in Complex Mixtures by Sequential Protein and Peptide Metal-affinity Chromatography and Analysis by Tandem Mass Spectrometry Science's STKE : Signal Transduction Knowledge Environment. Aug, 2005 | Pubmed ID: 16118397 Proteomic Analysis of in Vivo Phosphorylated Synaptic Proteins The Journal of Biological Chemistry. Feb, 2005 | Pubmed ID: 15572359 שיטה כמותית ומהירה השינוי Post-translational וגרסא מופעלת מיפוי של פפטידים כדי הגנום Christoph N. Schlaffner1,2,3, Georg J. Pirklbauer2, Andreas Bender3, Judith A.J. Steen1, Jyoti S. Choudhary2,4 1Department of Neurobiology, F. M. Kirby Neurobiology Center, Boston Children's Hospital, Harvard Medical School, 2Proteomic Mass Spectrometry, Wellcome Trust Sanger Institute, Wellcome Genome Campus, 3Centre for Molecular Informatics, Department of Chemistry, University of Cambridge, 4Functional Proteomics Group, Chester Beatty Laboratories, Institute of Cancer Research JoVE 57633 Genetics פתרון מתחמי פרוטאין טהור זיקה לפי דף Native הכחול פרופיל מתאם חלבון Mercedes Pardo1, Daniel Bode1, Lu Yu1, Jyoti S. Choudhary1 1Proteomic Mass Spectrometry, Wellcome Trust Sanger Institute JoVE 55498 Biochemistry
שיטה כמותית ומהירה השינוי Post-translational וגרסא מופעלת מיפוי של פפטידים כדי הגנום Christoph N. Schlaffner1,2,3, Georg J. Pirklbauer2, Andreas Bender3, Judith A.J. Steen1, Jyoti S. Choudhary2,4 1Department of Neurobiology, F. M. Kirby Neurobiology Center, Boston Children's Hospital, Harvard Medical School, 2Proteomic Mass Spectrometry, Wellcome Trust Sanger Institute, Wellcome Genome Campus, 3Centre for Molecular Informatics, Department of Chemistry, University of Cambridge, 4Functional Proteomics Group, Chester Beatty Laboratories, Institute of Cancer Research JoVE 57633 Genetics
פתרון מתחמי פרוטאין טהור זיקה לפי דף Native הכחול פרופיל מתאם חלבון Mercedes Pardo1, Daniel Bode1, Lu Yu1, Jyoti S. Choudhary1 1Proteomic Mass Spectrometry, Wellcome Trust Sanger Institute JoVE 55498 Biochemistry