Martin Eisenacher Medizinisches Proteom-Center, Medical Faculty Ruhr-University Bochum Biography Publications Institution JoVE Articles Martin Eisenacher has not added a biography. If you are Martin Eisenacher and would like to personalize this page please email our Author Liaison for assistance. Publications NTRK1/TrkA Signaling in Neuroblastoma Cells Induces Nuclear Reorganization and Intra-Nuclear Aggregation of Lamin A/C Cancers. Oct, 2021 | Pubmed ID: 34771457 The PRIDE Database Resources in 2022: a Hub for Mass Spectrometry-based Proteomics Evidences Nucleic Acids Research. Nov, 2021 | Pubmed ID: 34723319 A Proteomics Sample Metadata Representation for Multiomics Integration and Big Data Analysis Nature Communications. 10, 2021 | Pubmed ID: 34615866 Advanced Fiber Type-Specific Protein Profiles Derived from Adult Murine Skeletal Muscle Proteomes. Jun, 2021 | Pubmed ID: 34201234 Computertomography-Based Prediction of Complete Response Following Neoadjuvant Chemoradiotherapy of Locally Advanced Rectal Cancer Frontiers in Oncology. 2021 | Pubmed ID: 34136378 Establishing a Custom-Fit Data-Independent Acquisition Method for Label-Free Proteomics Methods in Molecular Biology (Clifton, N.J.). 2021 | Pubmed ID: 33950500 Important Issues in Planning a Proteomics Experiment: Statistical Considerations of Quantitative Proteomic Data Methods in Molecular Biology (Clifton, N.J.). 2021 | Pubmed ID: 33950479 Small RNAs As Biomarkers to Differentiate Benign and Malign Prostate Diseases: An Alternative for Transrectal Punch Biopsy of the Prostate? PloS One. 2021 | Pubmed ID: 33760831 MaCPepDB: A Database to Quickly Access All Tryptic Peptides of the UniProtKB Journal of Proteome Research. 04, 2021 | Pubmed ID: 33724838 Implementing FAIR Data Management Within the German Network for Bioinformatics Infrastructure (de.NBI) Exemplified by Selected Use Cases Briefings in Bioinformatics. 09, 2021 | Pubmed ID: 33589928 Quantitative Analysis of Proteome Dynamics in a Mouse Model of Asthma Clinical and Experimental Allergy : Journal of the British Society for Allergy and Clinical Immunology. Nov, 2021 | Pubmed ID: 33550702 Spatial Proteomics Revealed a CXCL1-dependent Crosstalk Between the Urothelium and Relocated Macrophages Through IL-6 During an Acute Bacterial Infection in the Urinary Bladder Mucosal Immunology. 07, 2020 | Pubmed ID: 32112048 CalibraCurve: A Tool for Calibration of Targeted MS-Based Measurements Proteomics. 06, 2020 | Pubmed ID: 32086983 Reproducibility, Specificity and Accuracy of Relative Quantification Using Spectral Library-based Data-independent Acquisition Molecular & Cellular Proteomics : MCP. 01, 2020 | Pubmed ID: 31699904 Let Me Infuse This for You - A Way to Solve the First YPIC Challenge EuPA Open Proteomics. Mar, 2019 | Pubmed ID: 31890549 Digital Droplet PCR-based Chimerism Analysis for Monitoring of Hematopoietic Engraftment After Allogeneic Stem Cell Transplantation International Journal of Laboratory Hematology. Oct, 2019 | Pubmed ID: 31225701 Proteomics Standards Initiative Extended FASTA Format Journal of Proteome Research. 06, 2019 | Pubmed ID: 31081335 Monocytes-neutrophils-ratio As Predictive Marker for Failure of First Induction Therapy in AML Blood Cells, Molecules & Diseases. 07, 2019 | Pubmed ID: 31029023 Noninvasive Diagnosis of Urothelial Cancer in Urine Using DNA Hypermethylation Signatures-Gender Matters International Journal of Cancer. 11, 2019 | Pubmed ID: 31008534 Integrated Fourier Transform Infrared Imaging and Proteomics for Identification of a Candidate Histochemical Biomarker in Bladder Cancer The American Journal of Pathology. 03, 2019 | Pubmed ID: 30770125 Protein Inference Using PIA Workflows and PSI Standard File Formats Journal of Proteome Research. 02, 2019 | Pubmed ID: 30474983 Direct-acting Antivirals-based Therapy Decreases Hepatic Fibrosis Serum Biomarker Microfibrillar-associated Protein 4 in Hepatitis C Patients Clinical and Molecular Hepatology. 03, 2019 | Pubmed ID: 30449076 The PRIDE Database and Related Tools and Resources in 2019: Improving Support for Quantification Data Nucleic Acids Research. 01, 2019 | Pubmed ID: 30395289 Protein Variability in Cerebrospinal Fluid and Its Possible Implications for Neurological Protein Biomarker Research PloS One. 2018 | Pubmed ID: 30496192 Characterization of Cerebrospinal Fluid Via Data-Independent Acquisition Mass Spectrometry Journal of Proteome Research. 10, 2018 | Pubmed ID: 30207155 MicroRNA-30c As a Novel Diagnostic Biomarker for Primary and Secondary B-cell Lymphoma of the CNS Journal of Neuro-oncology. May, 2018 | Pubmed ID: 29327175 A Community Proposal to Integrate Proteomics Activities in ELIXIR F1000Research. 2017 | Pubmed ID: 28713550 BioInfra.Prot: A Comprehensive Proteomics Workflow Including Data Standardization, Protein Inference, Expression Analysis and Data Publication Journal of Biotechnology. Nov, 2017 | Pubmed ID: 28606611 Spatial and Molecular Resolution of Diffuse Malignant Mesothelioma Heterogeneity by Integrating Label-free FTIR Imaging, Laser Capture Microdissection and Proteomics Scientific Reports. 03, 2017 | Pubmed ID: 28358042 The Human Proteome Organization-Proteomics Standards Initiative Quality Control Working Group: Making Quality Control More Accessible for Biological Mass Spectrometry Analytical Chemistry. 04, 2017 | Pubmed ID: 28318237 Comprehensive Proteomic Analysis of Penicillium Verrucosum Proteomics. May, 2017 | Pubmed ID: 28267294 Proteomics of Rimmed Vacuoles Define New Risk Allele in Inclusion Body Myositis Annals of Neurology. Feb, 2017 | Pubmed ID: 28009083 Shotgun Proteomic Analysis of Yersinia Ruckeri Strains Under Normal and Iron-limited Conditions Veterinary Research. 10, 2016 | Pubmed ID: 27716418 Flow Cytometric Characterization of Microglia in the Offspring of PolyI:C Treated Mice Brain Research. Apr, 2016 | Pubmed ID: 26872595 PAA: an R/bioconductor Package for Biomarker Discovery with Protein Microarrays Bioinformatics (Oxford, England). 05, 2016 | Pubmed ID: 26803161 Circulating U2 Small Nuclear RNA Fragments As a Diagnostic and Prognostic Biomarker in Lung Cancer Patients Journal of Cancer Research and Clinical Oncology. Apr, 2016 | Pubmed ID: 26687686 Low-bias Phosphopeptide Enrichment from Scarce Samples Using Plastic Antibodies Scientific Reports. Jul, 2015 | Pubmed ID: 26126808 The Challenge of On-tissue Digestion for MALDI MSI- a Comparison of Different Protocols to Improve Imaging Experiments Analytical and Bioanalytical Chemistry. Mar, 2015 | Pubmed ID: 25687681 Developing New Methods to Answer Old and New Questions in Neurodegenerative Diseases: 21(st) Workshop of the HUPO Brain Proteome Project (HBPP) 23-24 January 2014, Honolulu, Hawaii Proteomics. Jun, 2014 | Pubmed ID: 24753468 Autoimmune Profiling with Protein Microarrays in Clinical Applications Biochimica Et Biophysica Acta. May, 2014 | Pubmed ID: 24607371 Highly Immunoreactive IgG Antibodies Directed Against a Set of Twenty Human Proteins in the Sera of Patients with Amyotrophic Lateral Sclerosis Identified by Protein Array PloS One. 2014 | Pubmed ID: 24586901 Computational Proteomics in the Post-identification Era Biochimica Et Biophysica Acta. Jan, 2014 | Pubmed ID: 24315217 Amyloid Beta A4 Precursor Protein-binding Family B Member 1 (FE65) Interactomics Revealed Synaptic Vesicle Glycoprotein 2A (SV2A) and Sarcoplasmic/endoplasmic Reticulum Calcium ATPase 2 (SERCA2) As New Binding Proteins in the Human Brain Molecular & Cellular Proteomics : MCP. Feb, 2014 | Pubmed ID: 24284412 Detection of Patient Subgroups with Differential Expression in Omics Data: a Comprehensive Comparison of Univariate Measures PloS One. 2013 | Pubmed ID: 24278130 Individual Profiling of Circulating Tumor Cell Composition and Therapeutic Outcome in Patients with Hepatocellular Carcinoma Translational Oncology. Aug, 2013 | Pubmed ID: 23908685 Redox Proteomics Uncovers Peroxynitrite-sensitive Proteins That Help Escherichia Coli to Overcome Nitrosative Stress The Journal of Biological Chemistry. May, 2013 | Pubmed ID: 23696645 Improving the Default Data Analysis Workflow for Large Autoimmune Biomarker Discovery Studies with ProtoArrays Proteomics. Jul, 2013 | Pubmed ID: 23616427 FE65 Regulates and Interacts with the Bloom Syndrome Protein in Dynamic Nuclear Spheres - Potential Relevance to Alzheimer's Disease Journal of Cell Science. Jun, 2013 | Pubmed ID: 23572515 Sense and Nonsense of Pathway Analysis Software in Proteomics Journal of Proteome Research. Dec, 2011 | Pubmed ID: 21978018 Laser Microdissection-Based Protocol for the LC-MS/MS Analysis of the Proteomic Profile of Neuromelanin Granules Maximilian Wulf1,2, Katalin Barkovits-Boeddinghaus1,2, Paula Sommer1,2, Karin Schork1,2, Martin Eisenacher1,2, Peter Riederer3,4, Manfred Gerlach5, Steffen Kösters1,2, Britta Eggers*1,2, Katrin Marcus*1,2 1Medizinisches Proteom-Center, Medical Faculty, Ruhr-University Bochum, 2Medical Proteome Analysis, Center for Proteindiagnostics (PRODI), Ruhr-University Bochum, 3Center of Mental Health; Clinic and Policlinic for Psychiatry, Psychosomatics and Psychotherapy, University Hospital Wuerzburg, 4Psychiatry Department of Clinical Research, University of Southern Denmark Odense University Hospital, 5Center of Mental Health, Department of Child and Adolescent Psychiatry, Psychosomatics and Psychotherapy, University Hospital of Wuerzburg, University of Wuerzburg JoVE 63289 Neuroscience
Laser Microdissection-Based Protocol for the LC-MS/MS Analysis of the Proteomic Profile of Neuromelanin Granules Maximilian Wulf1,2, Katalin Barkovits-Boeddinghaus1,2, Paula Sommer1,2, Karin Schork1,2, Martin Eisenacher1,2, Peter Riederer3,4, Manfred Gerlach5, Steffen Kösters1,2, Britta Eggers*1,2, Katrin Marcus*1,2 1Medizinisches Proteom-Center, Medical Faculty, Ruhr-University Bochum, 2Medical Proteome Analysis, Center for Proteindiagnostics (PRODI), Ruhr-University Bochum, 3Center of Mental Health; Clinic and Policlinic for Psychiatry, Psychosomatics and Psychotherapy, University Hospital Wuerzburg, 4Psychiatry Department of Clinical Research, University of Southern Denmark Odense University Hospital, 5Center of Mental Health, Department of Child and Adolescent Psychiatry, Psychosomatics and Psychotherapy, University Hospital of Wuerzburg, University of Wuerzburg JoVE 63289 Neuroscience