Nozomu Yachie Synthetic Biology Division, Research Center for Advanced Science and Technology University of Tokyo Biography Publications Institution JoVE Articles Nozomu Yachie has not added a biography. If you are Nozomu Yachie and would like to personalize this page please email our Author Liaison for assistance. Publications Highly Combinatorial Genetic Interaction Analysis Reveals a Multi-Drug Transporter Influence Network Cell Systems. Jan, 2020 | Pubmed ID: 31668799 A Genome-scale CRISPR/Cas9 Knockout Screening Reveals SH3D21 As a Sensitizer for Gemcitabine Scientific Reports. Dec, 2019 | Pubmed ID: 31844142 The Role of Structural Pleiotropy and Regulatory Evolution in the Retention of Heteromers of Paralogs ELife. 08, 2019 | Pubmed ID: 31454312 DNA Barcodes Evolve for High-resolution Cell Lineage Tracing Current Opinion in Chemical Biology. 10, 2019 | Pubmed ID: 31212208 DNA Event Recorders Send Past Information of Cells to the Time of Observation Current Opinion in Chemical Biology. 10, 2019 | Pubmed ID: 31200335 Complete Genome Sequence of Sp. Strain KH172YL61, Isolated from Deep-Sea Sediments in the Nankai Trough, Japan Microbiology Resource Announcements. Apr, 2019 | Pubmed ID: 31000557 : A Computational Workflow for Designing Libraries of Guide RNAs for CRISPR-Mediated Base Editing Genetics. 06, 2019 | Pubmed ID: 30936113 Fast and Global Detection of Periodic Sequence Repeats in Large Genomic Resources Nucleic Acids Research. 01, 2019 | Pubmed ID: 30304510 Engineered CRISPR-Cas9 Nuclease with Expanded Targeting Space Science (New York, N.Y.). 09, 2018 | Pubmed ID: 30166441 Double Selection Enhances the Efficiency of Target-AID and Cas9-Based Genome Editing in Yeast G3 (Bethesda, Md.). 10, 2018 | Pubmed ID: 30097473 Systematic Analysis of Ca Homeostasis in Based on Chemical-genetic Interaction Profiles Molecular Biology of the Cell. Nov, 2017 | Pubmed ID: 28566553 Robotic Crowd Biology with Maholo LabDroids Nature Biotechnology. 04, 2017 | Pubmed ID: 28398329 Targeted Nucleotide Editing Using Hybrid Prokaryotic and Vertebrate Adaptive Immune Systems Science (New York, N.Y.). 09, 2016 | Pubmed ID: 27492474 Pooled-matrix Protein Interaction Screens Using Barcode Fusion Genetics Molecular Systems Biology. Apr, 2016 | Pubmed ID: 27107012 Comprehensive Analysis of the SUL1 Promoter of Saccharomyces Cerevisiae Genetics. 05, 2016 | Pubmed ID: 26936925 Tight Associations Between Transcription Promoter Type and Epigenetic Variation in Histone Positioning and Modification BMC Genomics. 2011 | Pubmed ID: 21846408 Computational Analysis Suggests a Highly Bendable, Fragile Structure for Nucleosomal DNA Gene. May, 2011 | Pubmed ID: 21338662 Integrative Features of the Yeast Phosphoproteome and Protein-protein Interaction Map PLoS Computational Biology. 2011 | Pubmed ID: 21298081 Towards the Systematic Discovery of Signal Transduction Networks Using Phosphorylation Dynamics Data BMC Bioinformatics. 2010 | Pubmed ID: 20459641 In Silico Analysis of Phosphoproteome Data Suggests a Rich-get-richer Process of Phosphosite Accumulation over Evolution Molecular & Cellular Proteomics : MCP. May, 2009 | Pubmed ID: 19136663 Stabilizing Synthetic Data in the DNA of Living Organisms Systems and Synthetic Biology. Jun, 2008 | Pubmed ID: 19083123 Comprehensive Analysis of Archaeal TRNA Genes Reveals Rapid Increase of TRNA Introns in the Order Thermoproteales Molecular Biology and Evolution. Dec, 2008 | Pubmed ID: 18832079 Permuted TRNA Genes Expressed Via a Circular RNA Intermediate in Cyanidioschyzon Merolae Science (New York, N.Y.). Oct, 2007 | Pubmed ID: 17947580 Computational Analysis of MicroRNA-mediated Antiviral Defense in Humans FEBS Letters. Oct, 2007 | Pubmed ID: 17825824 Bioinformatic Analysis of Post-transcriptional Regulation by UORF in Human and Mouse FEBS Letters. Sep, 2007 | Pubmed ID: 17692847 EXpanda: an Integrated Platform for Network Analysis and Visualization In Silico Biology. 2007 | Pubmed ID: 17688438 In Silico Screening of Archaeal TRNA-encoding Genes Having Multiple Introns with Bulge-helix-bulge Splicing Motifs RNA (New York, N.Y.). May, 2007 | Pubmed ID: 17369313 Alignment-based Approach for Durable Data Storage into Living Organisms Biotechnology Progress. Mar-Apr, 2007 | Pubmed ID: 17253725 SPLITS: a New Program for Predicting Split and Intron-containing TRNA Genes at the Genome Level In Silico Biology. 2006 | Pubmed ID: 17274770 On the Interplay of Gene Positioning and the Role of Rho-independent Terminators in Escherichia Coli FEBS Letters. Dec, 2006 | Pubmed ID: 17156778 Prediction of Liquid Chromatographic Retention Times of Peptides Generated by Protease Digestion of the Escherichia Coli Proteome Using Artificial Neural Networks Journal of Proteome Research. Dec, 2006 | Pubmed ID: 17137332 HybGFS: a Hybrid Method for Genome-fingerprint Scanning BMC Bioinformatics. 2006 | Pubmed ID: 17069662 Prediction of Non-coding and Antisense RNA Genes in Escherichia Coli with Gapped Markov Model Gene. May, 2006 | Pubmed ID: 16564143 Computational Analysis of MicroRNA Targets in Caenorhabditis Elegans Gene. Jan, 2006 | Pubmed ID: 16356665 Uso de embriões congelados para produção de ratos geneticamente modificados Hirofumi Nishizono*1,2,3, Mohamed Darwish*4,5, Hideki Uosaki6,7, Nanami Masuyama8,9,10, Motoaki Seki8,11, Hiroyuki Abe3, Nozomu Yachie8,9,10,12,13, Ryohei Yasuda1 1Max Planck Florida Institute for Neuroscience, 2Life Science Research Center, University of Toyama, 3Department of Biochemical Engineering, Graduate School of Science and Engineering, Yamagata University, 4Graduate School of Innovative Life Science, University of Toyama, 5Department of Biochemistry, Faculty of Pharmacy, Cairo University, 6Division of Regenerative Medicine, Center for Molecular Medicine, Jichi Medical University, 7Division of Stem Cell Research and Drug Development, Center for Development of Advanced Medical Technology, Jichi Medical University, 8Synthetic Biology Division, Research Center for Advanced Science and Technology, University of Tokyo, 9Institute for Advanced Biosciences, Keio University, 10Graduate School of Media and Governance, Keio University, 11Department of Molecular Oncology, Graduate School of Medicine, Chiba University, 12Department of Biological Sciences, School of Science, University of Tokyo, 13College of Arts and Sciences, University of Tokyo JoVE 60808 Genetics O Processo de monstro verde para a Geração de linhagens de levedura de transporte deleções de genes múltiplos Yo Suzuki1, Jason Stam1, Mark Novotny2, Nozomu Yachie3, Roger S. Lasken2, Frederick P. Roth3,4 1Department of Synthetic Biology and Bioenergy, J. Craig Venter Institute, 2Department of Microbial and Environmental Genomics, J. Craig Venter Institute, 3Donnelly Centre & Department of Molecular Genetics, University of Toronto, 4Lunenfeld Research Institute, Mt Sinai Hospital JoVE 4072 Biology
Uso de embriões congelados para produção de ratos geneticamente modificados Hirofumi Nishizono*1,2,3, Mohamed Darwish*4,5, Hideki Uosaki6,7, Nanami Masuyama8,9,10, Motoaki Seki8,11, Hiroyuki Abe3, Nozomu Yachie8,9,10,12,13, Ryohei Yasuda1 1Max Planck Florida Institute for Neuroscience, 2Life Science Research Center, University of Toyama, 3Department of Biochemical Engineering, Graduate School of Science and Engineering, Yamagata University, 4Graduate School of Innovative Life Science, University of Toyama, 5Department of Biochemistry, Faculty of Pharmacy, Cairo University, 6Division of Regenerative Medicine, Center for Molecular Medicine, Jichi Medical University, 7Division of Stem Cell Research and Drug Development, Center for Development of Advanced Medical Technology, Jichi Medical University, 8Synthetic Biology Division, Research Center for Advanced Science and Technology, University of Tokyo, 9Institute for Advanced Biosciences, Keio University, 10Graduate School of Media and Governance, Keio University, 11Department of Molecular Oncology, Graduate School of Medicine, Chiba University, 12Department of Biological Sciences, School of Science, University of Tokyo, 13College of Arts and Sciences, University of Tokyo JoVE 60808 Genetics
O Processo de monstro verde para a Geração de linhagens de levedura de transporte deleções de genes múltiplos Yo Suzuki1, Jason Stam1, Mark Novotny2, Nozomu Yachie3, Roger S. Lasken2, Frederick P. Roth3,4 1Department of Synthetic Biology and Bioenergy, J. Craig Venter Institute, 2Department of Microbial and Environmental Genomics, J. Craig Venter Institute, 3Donnelly Centre & Department of Molecular Genetics, University of Toronto, 4Lunenfeld Research Institute, Mt Sinai Hospital JoVE 4072 Biology