Shu-lin Liu Program in Translational Biomechanics, Institute of Translational Medicine and Therapeutics University of Pennsylvania Biography Publications Institution JoVE Articles Shu-lin Liu has not added a biography. If you are Shu-lin Liu and would like to personalize this page please email our Author Liaison for assistance. Publications A Rapid Loop-mediated Isothermal Amplification (LAMP) Method for Detection of the Macrolide-streptogramin Type B Resistance Gene MsrA in Staphylococcus Aureus Journal of Global Antimicrobial Resistance. Aug, 2016 | Pubmed ID: 27607914 Live Attenuated Salmonella Displaying HIV-1 10E8 Epitope on Fimbriae: Systemic and Mucosal Immune Responses in BALB/c Mice by Mucosal Administration Scientific Reports. 2016 | Pubmed ID: 27411313 Combined Effects of Age and Polymorphisms in Notch3 in the Pathogenesis of Cerebral Infarction Disease Metabolic Brain Disease. Oct, 2016 | Pubmed ID: 27370894 Characterization of Human Bone Morphogenetic Protein Gene Variants for Possible Roles in Congenital Heart Disease Molecular Medicine Reports. Aug, 2016 | Pubmed ID: 27357418 Genotyping of Salmonella with Lineage-specific Genes: Correlation with Serotyping International Journal of Infectious Diseases : IJID : Official Publication of the International Society for Infectious Diseases. Aug, 2016 | Pubmed ID: 27343985 Cloning, Expression, and Characterization of a Four-component O-demethylase from Human Intestinal Bacterium Eubacterium Limosum ZL-II Applied Microbiology and Biotechnology. Nov, 2016 | Pubmed ID: 27236811 SOX7 Co-regulates Wnt/β-catenin Signaling with Axin-2: Both Expressed at Low Levels in Breast Cancer Scientific Reports. 2016 | Pubmed ID: 27188720 Polymorphisms in the CHIT1 Gene: Associations with Colorectal Cancer Oncotarget. May, 2016 | Pubmed ID: 27153562 Dissecting the Factors Affecting the Fluorescence Stability of Quantum Dots in Live Cells ACS Applied Materials & Interfaces. Apr, 2016 | Pubmed ID: 26998815 Molecular Genotyping of HIV-1 Strains from Newly Infected Men Who Have Sex with Men in Harbin, China AIDS Research and Human Retroviruses. Jun, 2016 | Pubmed ID: 26892477 Tracking Single Viruses Infecting Their Host Cells Using Quantum Dots Chemical Society Reviews. Mar, 2016 | Pubmed ID: 26695711 Matrix Metalloproteinase-12 is an Essential Mediator of Acute and Chronic Arterial Stiffening Scientific Reports. Nov, 2015 | Pubmed ID: 26608672 Characterization of Transcriptional Repressor Gene MSX1 Variations for Possible Associations with Congenital Heart Diseases PloS One. 2015 | Pubmed ID: 26556783 Clicking Hydrazine and Aldehyde: The Way to Labeling of Viruses with Quantum Dots ACS Nano. Dec, 2015 | Pubmed ID: 26549044 Identification of Aberrant Chromosomal Regions in Human Breast Cancer Using Gene Expression Data and Related Gene Information Medical Science Monitor : International Medical Journal of Experimental and Clinical Research. 2015 | Pubmed ID: 26319982 Identification of a Novel Mutation Associated with Familial Adenomatous Polyposis and Colorectal Cancer International Journal of Molecular Medicine. Oct, 2015 | Pubmed ID: 26252958 Identification of Two Novel Critical Mutations in PCNT Gene Resulting in Microcephalic Osteodysplastic Primordial Dwarfism Type II Associated with Multiple Intracranial Aneurysms Metabolic Brain Disease. Dec, 2015 | Pubmed ID: 26231886 Complete Genome Sequence of Salmonella Enterica Subspecies Arizonae Str. RKS2983 Standards in Genomic Sciences. 2015 | Pubmed ID: 26203341 Characterization of SMAD3 Gene Variants for Possible Roles in Ventricular Septal Defects and Other Congenital Heart Diseases PloS One. 2015 | Pubmed ID: 26110764 Apolipoprotein E3 Inhibits Rho to Regulate the Mechanosensitive Expression of Cox2 PloS One. 2015 | Pubmed ID: 26068461 Profile of Differentially Expressed Intratumoral Cytokines to Predict the Immune-polarizing Side Effects of Tamoxifen in Breast Cancer Treatment American Journal of Cancer Research. 2015 | Pubmed ID: 25973310 Inherited Neurovascular Diseases Affecting Cerebral Blood Vessels and Smooth Muscle Metabolic Brain Disease. Oct, 2015 | Pubmed ID: 25893882 N-Cadherin Induction by ECM Stiffness and FAK Overrides the Spreading Requirement for Proliferation of Vascular Smooth Muscle Cells Cell Reports. Mar, 2015 | Pubmed ID: 25753414 Optimization of Ultrasound Extraction of Alisma Orientalis Polysaccharides by Response Surface Methodology and Their Antioxidant Activities Carbohydrate Polymers. Mar, 2015 | Pubmed ID: 25563949 Individual-level Analysis of Differential Expression of Genes and Pathways for Personalized Medicine Bioinformatics (Oxford, England). Jan, 2015 | Pubmed ID: 25165092 [Study on Sustainable Development of Industy of Ethnic Medicine in Minority Area] Zhongguo Zhong Yao Za Zhi = Zhongguo Zhongyao Zazhi = China Journal of Chinese Materia Medica. Aug, 2014 | Pubmed ID: 25509310 Simultaneous in Situ Quantification of Two Cellular Lipid Pools Using Orthogonal Fluorescent Sensors Angewandte Chemie (International Ed. in English). Dec, 2014 | Pubmed ID: 25345859 Reduced Expression of SOX7 in Ovarian Cancer: a Novel Tumor Suppressor Through the Wnt/β-catenin Signaling Pathway Journal of Ovarian Research. 2014 | Pubmed ID: 25297608 CTAG-containing Cleavage Site Profiling to Delineate Salmonella into Natural Clusters PloS One. 2014 | Pubmed ID: 25137186 Characterization of Nodal/TGF-lefty Signaling Pathway Gene Variants for Possible Roles in Congenital Heart Diseases PloS One. 2014 | Pubmed ID: 25111179 Three-dimensional Tracking of Rab5- and Rab7-associated Infection Process of Influenza Virus Small (Weinheim an Der Bergstrasse, Germany). Nov, 2014 | Pubmed ID: 24976105 Comparative Genomic Analysis Between Typhoidal and Non-typhoidal Salmonella Serovars Reveals Typhoid-specific Protein Families Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. Aug, 2014 | Pubmed ID: 24951835 A FAK-Cas-Rac-lamellipodin Signaling Module Transduces Extracellular Matrix Stiffness into Mechanosensitive Cell Cycling Science Signaling. Jun, 2014 | Pubmed ID: 24939893 Differential Efficiency in Exogenous DNA Acquisition Among Closely Related Salmonella Strains: Implications in Bacterial Speciation BMC Microbiology. 2014 | Pubmed ID: 24928416 Dynamics of Aeolian Desertification and Its Driving Forces in the Horqin Sandy Land, Northern China Environmental Monitoring and Assessment. Oct, 2014 | Pubmed ID: 24891073 Globally Visualizing the Microtubule-dependent Transport Behaviors of Influenza Virus in Live Cells Analytical Chemistry. Apr, 2014 | Pubmed ID: 24678700 Evaluation of Nonspecific Interactions Between Quantum Dots and Proteins Physical Chemistry Chemical Physics : PCCP. May, 2014 | Pubmed ID: 24652120 Exploring Sialic Acid Receptors-related Infection Behavior of Avian Influenza Virus in Human Bronchial Epithelial Cells by Single-particle Tracking Small (Weinheim an Der Bergstrasse, Germany). Jul, 2014 | Pubmed ID: 24648118 Prediction of Bacterial Type IV Secreted Effectors by C-terminal Features BMC Genomics. 2014 | Pubmed ID: 24447430 Non-contiguous Finished Genome Sequence and Description of Salmonella Enterica Subsp. Houtenae Str. RKS3027 Standards in Genomic Sciences. 2013 | Pubmed ID: 23991252 Fast and High-accuracy Localization for Three-dimensional Single-particle Tracking Scientific Reports. 2013 | Pubmed ID: 23955270 Genomic Comparison of Salmonella Typhimurium DT104 with Non-DT104 Strains Molecular Genetics and Genomics : MGG. Nov, 2013 | Pubmed ID: 23933962 Genetic Boundaries to Delineate the Typhoid Agent and Other Salmonella Serotypes into Distinct Natural Lineages Genomics. Oct, 2013 | Pubmed ID: 23933189 Characterization of the Defects in the ATP Lid of E. Coli MutL That Cause Transient Hypermutability DNA Repair. Oct, 2013 | Pubmed ID: 23916559 Defining Natural Species of Bacteria: Clear-cut Genomic Boundaries Revealed by a Turning Point in Nucleotide Sequence Divergence BMC Genomics. 2013 | Pubmed ID: 23865772 [Hennekam Syndrome: a Case Report and Review of Literature] Zhonghua Nei Ke Za Zhi. Mar, 2013 | Pubmed ID: 23856108 Self-biotinylation and Site-specific Double Labeling of Baculovirus Using Quantum Dots for Single-virus In-situ Tracking Biomaterials. Oct, 2013 | Pubmed ID: 23831187 Type VIII Collagen Mediates Vessel Wall Remodeling After Arterial Injury and Fibrous Cap Formation in Atherosclerosis The American Journal of Pathology. Jun, 2013 | Pubmed ID: 23567639 Genomic Comparison Between Salmonella Gallinarum and Pullorum: Differential Pseudogene Formation Under Common Host Restriction PloS One. 2013 | Pubmed ID: 23555032 Identification of Genes to Differentiate Closely Related Salmonella Lineages PloS One. 2013 | Pubmed ID: 23441160 MiR-221/222 Compensates for Skp2-mediated P27 Degradation and is a Primary Target of Cell Cycle Regulation by Prostacyclin and CAMP PloS One. 2013 | Pubmed ID: 23409140 A Simple Point-of-care Microfluidic Immunomagnetic Fluorescence Assay for Pathogens Analytical Chemistry. Mar, 2013 | Pubmed ID: 23391352 Thrombomodulin Regulates Keratinocyte Differentiation and Promotes Wound Healing The Journal of Investigative Dermatology. Jun, 2013 | Pubmed ID: 23321922 Site-specific Labeling of Baculovirus in an Integrated Microfluidic Device Lab on a Chip. Mar, 2013 | Pubmed ID: 23299251 Pseudomonas Aeruginosa Isolates of Distinct Sub-genotypes Exhibit Similar Potential of Antimicrobial Resistance by Drugs Exposure Antonie Van Leeuwenhoek. Apr, 2013 | Pubmed ID: 23224438 Dextromethorphan Attenuates LPS-induced Adhesion Molecule Expression in Human Endothelial Cells Microcirculation (New York, N.Y. : 1994). Feb, 2013 | Pubmed ID: 23140507 The Type VI Secretion System Gene Cluster of Salmonella Typhimurium: Required for Full Virulence in Mice Journal of Basic Microbiology. Jul, 2013 | Pubmed ID: 22961625 The Antidepressant Effect of Secoisolariciresinol, a Lignan-type Phytoestrogen Constituent of Flaxseed, on Ovariectomized Mice Journal of Natural Medicines. Jan, 2013 | Pubmed ID: 22476613 Cardiovascular Protection by ApoE and ApoE-HDL Linked to Suppression of ECM Gene Expression and Arterial Stiffening Cell Reports. Nov, 2012 | Pubmed ID: 23103162 Myosin-driven Intercellular Transportation of Wheat Germ Agglutinin Mediated by Membrane Nanotubes Between Human Lung Cancer Cells ACS Nano. Nov, 2012 | Pubmed ID: 23102457 High-efficiency Dual Labeling of Influenza Virus for Single-virus Imaging Biomaterials. Nov, 2012 | Pubmed ID: 22854679 Identification of a Known Mutation in Notch 3 in Familiar CADASIL in China PloS One. 2012 | Pubmed ID: 22623959 Thrombomodulin is an Ezrin-interacting Protein That Controls Epithelial Morphology and Promotes Collective Cell Migration FASEB Journal : Official Publication of the Federation of American Societies for Experimental Biology. Aug, 2012 | Pubmed ID: 22593542 Inheritance of the Salmonella Virulence Plasmids: Mostly Vertical and Rarely Horizontal Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. Jul, 2012 | Pubmed ID: 22449772 Complete Genome Sequence of Salmonella Enterica Serovar Pullorum RKS5078 Journal of Bacteriology. Feb, 2012 | Pubmed ID: 22247537 Effectively and Efficiently Dissecting the Infection of Influenza Virus by Quantum-dot-based Single-particle Tracking ACS Nano. Jan, 2012 | Pubmed ID: 22117089 The 3Cs Provide a Novel Concept of Bacterial Species: Messages from the Genome As Illustrated by Salmonella Antonie Van Leeuwenhoek. Jan, 2012 | Pubmed ID: 22113699 A Novel Mutation in CACNA1S Gene Associated with Hypokalemic Periodic Paralysis Which Has a Gender Difference in the Penetrance Journal of Molecular Neuroscience : MN. Feb, 2012 | Pubmed ID: 21845430 Gene Decay in Shigella As an Incipient Stage of Host-adaptation PloS One. 2011 | Pubmed ID: 22110755 Thrombomodulin Domains Attenuate Atherosclerosis by Inhibiting Thrombin-induced Endothelial Cell Activation Cardiovascular Research. Nov, 2011 | Pubmed ID: 21840881 Discovery of Serum Biomarkers of Alcoholic Fatty Liver in a Rodent Model: C-reactive Protein Journal of Biomedical Science. 2011 | Pubmed ID: 21806828 Visualizing the Endocytic and Exocytic Processes of Wheat Germ Agglutinin by Quantum Dot-based Single-particle Tracking Biomaterials. Oct, 2011 | Pubmed ID: 21764443 Protective Effect of Hydrogen-rich Saline on Decompression Sickness in Rats Aviation, Space, and Environmental Medicine. Jun, 2011 | Pubmed ID: 21702310 Hydrogen Therapy May Be a Novel and Effective Treatment for COPD Frontiers in Pharmacology. 2011 | Pubmed ID: 21687512 Tn5AraOut Mutagenesis for the Identification of Yersinia Pestis Genes Involved in Resistance Towards Cationic Antimicrobial Peptides Microbial Pathogenesis. Sep, 2011 | Pubmed ID: 21575704 SPC-P1: a Pathogenicity-associated Prophage of Salmonella Paratyphi C BMC Genomics. 2010 | Pubmed ID: 21192789 MutL As a Genetic Switch of Bacterial Mutability: Turned on or off Through Repeat Copy Number Changes FEMS Microbiology Letters. Nov, 2010 | Pubmed ID: 20874753 Multiple Genetic Switches Spontaneously Modulating Bacterial Mutability BMC Evolutionary Biology. 2010 | Pubmed ID: 20836863 PEG-interspersed Nitrilotriacetic Acid-functionalized Quantum Dots for Site-specific Labeling of Prion Proteins Expressed on Cell Surfaces Biomaterials. Nov, 2010 | Pubmed ID: 20723972 Compromised T-cell Immunity and Virus-like Structure in a Patient with Pulmonary Hypertension American Journal of Respiratory and Critical Care Medicine. Aug, 2010 | Pubmed ID: 20675680 Production of Enterodiol from Defatted Flaxseeds Through Biotransformation by Human Intestinal Bacteria BMC Microbiology. 2010 | Pubmed ID: 20398397 Oral Vaccination with Attenuated Salmonella Enterica Strains Encoding T-cell Epitopes from Tumor Antigen NY-ESO-1 Induces Specific Cytotoxic T-lymphocyte Responses Clinical and Vaccine Immunology : CVI. Jun, 2010 | Pubmed ID: 20375244 A Genome Map of Salmonella Enterica Serovar Agona: Numerous Insertions and Deletions Reflecting the Evolutionary History of a Human Pathogen FEMS Microbiology Letters. Apr, 2009 | Pubmed ID: 19533840 Salmonella Expressing a T-cell Epitope from Sendai Virus Are Able to Induce Anti-infection Immunity Journal of Medical Microbiology. Sep, 2009 | Pubmed ID: 19528162 A Novel Inhibitory Effect of Antrodia Camphorata Extract on Vascular Smooth Muscle Cell Migration and Neointima Formation in Mice International Heart Journal. Mar, 2009 | Pubmed ID: 19367031 Salmonella Paratyphi C: Genetic Divergence from Salmonella Choleraesuis and Pathogenic Convergence with Salmonella Typhi PloS One. 2009 | Pubmed ID: 19229335 Dextromethorphan Reduces Oxidative Stress and Inhibits Atherosclerosis and Neointima Formation in Mice Cardiovascular Research. Apr, 2009 | Pubmed ID: 19189960 Ets-1 Mediates Platelet-derived Growth Factor-BB-induced Thrombomodulin Expression in Human Vascular Smooth Muscle Cells Cardiovascular Research. Mar, 2009 | Pubmed ID: 19091791 [Genomic Comparisons of Multiresistant Pseudomonas Aeruginosa Isolates Obtained from Surgical Intensive Care Unit] Zhonghua Yi Xue Za Zhi. Dec, 2008 | Pubmed ID: 19257960 Two Oral HBx Vaccines Delivered by Live Attenuated Salmonella: Both Eliciting Effective Anti-tumor Immunity Cancer Letters. May, 2008 | Pubmed ID: 18226855 Physical Mapping of Salmonella Genomes Methods in Molecular Biology (Clifton, N.J.). 2007 | Pubmed ID: 18363230 Diverse Genome Structures of Salmonella Paratyphi C BMC Genomics. 2007 | Pubmed ID: 17718928 Spontaneous Conversion Between MutL and 6 BpDeltamutL in Salmonella Typhimurium LT7: Association with Genome Diversification and Possible Roles in Bacterial Adaptation Genomics. Oct, 2007 | Pubmed ID: 17689047 Remodeling of Carotid Arteries is Associated with Increased Expression of Thrombomodulin in a Mouse Transverse Aortic Constriction Model Thrombosis and Haemostasis. Apr, 2007 | Pubmed ID: 17393030 The Effect of Statin on the Aortic Gene Expression Profiling International Journal of Cardiology. Jan, 2007 | Pubmed ID: 16678288 Phylogenetically Clustering of Rhizobia by Genome Structure: Application to Unclassified Rhizobium Journal of Environmental Sciences (China). 2006 | Pubmed ID: 17294652 A Novel Inhibitory Effect of Naloxone on Macrophage Activation and Atherosclerosis Formation in Mice Journal of the American College of Cardiology. Nov, 2006 | Pubmed ID: 17084265 Thrombomodulin Plays an Important Role in Arterial Remodeling and Neointima Formation in Mouse Carotid Ligation Model Thrombosis and Haemostasis. Jan, 2006 | Pubmed ID: 16543971 Genome Plasticity and Ori-ter Rebalancing in Salmonella Typhi Molecular Biology and Evolution. Feb, 2006 | Pubmed ID: 16237205 The Genome of Salmonella Enterica Serovar Gallinarum: Distinct Insertions/deletions and Rare Rearrangements Journal of Bacteriology. Jul, 2005 | Pubmed ID: 15995186 Diversity of Genome Structure in Salmonella Enterica Serovar Typhi Populations Journal of Bacteriology. Apr, 2005 | Pubmed ID: 15805510 [Establishment of a Method to Detect Multiple Antennae Carcinoembryonic Antigen (MA-CEA) and MA-CEA Level in the Sera of Patients with Malignant Tumors] Xi Bao Yu Fen Zi Mian Yi Xue Za Zhi = Chinese Journal of Cellular and Molecular Immunology. Nov, 2004 | Pubmed ID: 15555448 Morphine-promoted Survival of CEMx174 Cells in Early Stages of SIV Infection in Vitro: Involvement of the Multiple Molecular Mechanisms Toxicology in Vitro : an International Journal Published in Association with BIBRA. Aug, 2004 | Pubmed ID: 15130602 Salmonella Enterica Serovar Typhi Strains from Which SPI7, a 134-kilobase Island with Genes for Vi Exopolysaccharide and Other Functions, Has Been Deleted Journal of Bacteriology. May, 2004 | Pubmed ID: 15126484 Signaling Pathway Involved in Methionine Enkephalin-promoted Survival of Lymphocytes Infected by Simian Immunodeficiency Virus in the Early Stage in Vitro International Immunopharmacology. Jan, 2004 | Pubmed ID: 14975362 [Changes of Liver Function in Patients with Severe Viral Hepatitis Before and After Treatment with Hematological Replacement Therapy] Zhongguo Wei Zhong Bing Ji Jiu Yi Xue = Chinese Critical Care Medicine = Zhongguo Weizhongbing Jijiuyixue. Feb, 2003 | Pubmed ID: 12857479 Wavelet to Predict Bacterial Ori and Ter: a Tendency Towards a Physical Balance BMC Genomics. May, 2003 | Pubmed ID: 12732098 Genomic Diversification Among Archival Strains of Salmonella Enterica Serovar Typhimurium LT7 Journal of Bacteriology. Apr, 2003 | Pubmed ID: 12644482 Inversions over the Terminus Region in Salmonella and Escherichia Coli: IS200s As the Sites of Homologous Recombination Inverting the Chromosome of Salmonella Enterica Serovar Typhi Journal of Bacteriology. Nov, 2002 | Pubmed ID: 12399489 The Evolving Genome of Salmonella Enterica Serovar Pullorum Journal of Bacteriology. May, 2002 | Pubmed ID: 11976291 Medindo a rigidez Yong Ho Bae1,2, Shu-lin Liu1,2, Fitzroy J. Byfield3, Paul A. Janmey3, Richard K. Assoian1,2 1Program in Translational Biomechanics, Institute of Translational Medicine and Therapeutics, University of Pennsylvania, 2Department of Systems Pharmacology and Translational Therapeutics, University of Pennsylvania, 3Department of Physiology, University of Pennsylvania Biology
Medindo a rigidez Yong Ho Bae1,2, Shu-lin Liu1,2, Fitzroy J. Byfield3, Paul A. Janmey3, Richard K. Assoian1,2 1Program in Translational Biomechanics, Institute of Translational Medicine and Therapeutics, University of Pennsylvania, 2Department of Systems Pharmacology and Translational Therapeutics, University of Pennsylvania, 3Department of Physiology, University of Pennsylvania Biology