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Chromatin Interaction Analysis with Paired-End Tag Sequencing (ChIA-PET) for Mapping Chromatin Interactions and Understanding Transcription Regulation
 

Chromatin Interaction Analysis with Paired-End Tag Sequencing (ChIA-PET) for Mapping Chromatin Interactions and Understanding Transcription Regulation

Article DOI: 10.3791/3770-v • 21:56 min • April 30th, 2012
April 30th, 2012 •
*1, *1,2,3, 1, 1, 1, 1, 1, 1,3
1Genome Institute of Singapore, Agency for Science, Technology and Research, Singapore, 2A*STAR-Duke-NUS Neuroscience Research Partnership, Singapore, 3Department of Biochemistry, National University of Singapore, Singapore
* These authors contributed equally

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Chromatin Interaction Analysis by Paired-End Tag Sequencing (ChIA-PET) is a method for de novo detection of chromatin interactions, for better understanding of transcriptional control.

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Chromatin Interaction Analysis Paired-End Tag Sequencing ChIA-PET Mapping Chromatin Interactions Transcription Regulation Three-dimensional Structures Higher-order Conformations Nuclear Spaces Gene Promoters Regulatory Elements Transcription Factors Regulatory Sequences Network Of Transcription Regulation Coordination Chromatin Immunoprecipitation ChIP Chromatin Fragments Proximity Ligation Covalent Links DNA Fragments Chromatin Complexes MmeI Restriction Enzyme Sites Half-linkers PET Constructs
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