Masaki Miya Department of Ecology and Environmental Sciences Natural History Museum and Institute, Chiba Biography Publications Institution JoVE Articles Masaki Miya has not added a biography. If you are Masaki Miya and would like to personalize this page please email our Author Liaison for assistance. Publications Wide Distribution Range of Rhizobial Symbionts Associated with Pantropical Sea-dispersed Legumes Antonie Van Leeuwenhoek. Dec, 2016 | Pubmed ID: 27664091 Structure and Variation of the Mitochondrial Genome of Fishes BMC Genomics. Sep, 2016 | Pubmed ID: 27604148 Preservation Obscures Pelagic Deep-Sea Fish Diversity: Doubling the Number of Sole-Bearing Opisthoproctids and Resurrection of the Genus Monacoa (Opisthoproctidae, Argentiniformes) PloS One. 2016 | Pubmed ID: 27508419 Correction: Environmental DNA As a 'Snapshot' of Fish Distribution: A Case Study of Japanese Jack Mackerel in Maizuru Bay, Sea of Japan PloS One. 2016 | Pubmed ID: 27042824 Environmental DNA As a 'Snapshot' of Fish Distribution: A Case Study of Japanese Jack Mackerel in Maizuru Bay, Sea of Japan PloS One. 2016 | Pubmed ID: 26933889 Composition of Glycosaminoglycans in Elasmobranchs Including Several Deep-sea Sharks: Identification of Chondroitin/dermatan Sulfate from the Dried Fins of Isurus Oxyrinchus and Prionace Glauca PloS One. 2015 | Pubmed ID: 25803296 Phylogeny and Polyploidy: Resolving the Classification of Cyprinine Fishes (Teleostei: Cypriniformes) Molecular Phylogenetics and Evolution. Apr, 2015 | Pubmed ID: 25698355 Phylogenetic Relationships of Acheilognathidae (Cypriniformes: Cyprinoidea) As Revealed from Evidence of Both Nuclear and Mitochondrial Gene Sequence Variation: Evidence for Necessary Taxonomic Revision in the Family and the Identification of Cryptic Species Molecular Phylogenetics and Evolution. Dec, 2014 | Pubmed ID: 25238947 Mitochondrial Genomic Investigation of Flatfish Monophyly Gene. Nov, 2014 | Pubmed ID: 25172210 Mitogenomic Phylogeny of the Percichthyidae and Centrarchiformes (Percomorphaceae): Comparison with Recent Nuclear Gene-based Studies and Simultaneous Analysis Gene. Oct, 2014 | Pubmed ID: 25026502 Mitogenomic Circumscription of a Novel Percomorph Fish Clade Mainly Comprising "Syngnathoidei" (Teleostei) Gene. Jun, 2014 | Pubmed ID: 24680775 Phylogeny of the Elopomorpha (Teleostei): Evidence from Six Nuclear and Mitochondrial Markers Molecular Phylogenetics and Evolution. Jan, 2014 | Pubmed ID: 24041936 Limits and Phylogenetic Relationships of East Asian Fishes in the Subfamily Oxygastrinae (Teleostei: Cypriniformes: Cyprinidae) Zootaxa. 2013 | Pubmed ID: 25232592 Evolutionary Origin of the Scombridae (tunas and Mackerels): Members of a Paleogene Adaptive Radiation with 14 Other Pelagic Fish Families PloS One. 2013 | Pubmed ID: 24023883 MitoFish and MitoAnnotator: a Mitochondrial Genome Database of Fish with an Accurate and Automatic Annotation Pipeline Molecular Biology and Evolution. Nov, 2013 | Pubmed ID: 23955518 Pike and Salmon As Sister Taxa: Detailed Intraclade Resolution and Divergence Time Estimation of Esociformes + Salmoniformes Based on Whole Mitochondrial Genome Sequences Gene. Nov, 2013 | Pubmed ID: 23954876 Mitogenomic Sequences and Evidence from Unique Gene Rearrangements Corroborate Evolutionary Relationships of Myctophiformes (Neoteleostei) BMC Evolutionary Biology. 2013 | Pubmed ID: 23731841 Mitogenomic Evidence for an Indo-West Pacific Origin of the Clupeoidei (Teleostei: Clupeiformes) PloS One. 2013 | Pubmed ID: 23431379 Phylogeny and Biogeography of Highly Diverged Freshwater Fish Species (Leuciscinae, Cyprinidae, Teleostei) Inferred from Mitochondrial Genome Analysis Gene. Feb, 2013 | Pubmed ID: 23174367 Molecular Phylogeny of the Cyprinid Tribe Labeonini (Teleostei: Cypriniformes) Molecular Phylogenetics and Evolution. Nov, 2012 | Pubmed ID: 22728909 Comparable Ages for the Independent Origins of Electrogenesis in African and South American Weakly Electric Fishes PloS One. 2012 | Pubmed ID: 22606250 Body Plan Convergence in the Evolution of Skates and Rays (Chondrichthyes: Batoidea) Molecular Phylogenetics and Evolution. Apr, 2012 | Pubmed ID: 22209858 A 'living Fossil' Eel (Anguilliformes: Protanguillidae, Fam. Nov.) from an Undersea Cave in Palau Proceedings. Biological Sciences. Mar, 2012 | Pubmed ID: 21849321 Evolutionary History of Otophysi (Teleostei), a Major Clade of the Modern Freshwater Fishes: Pangaean Origin and Mesozoic Radiation BMC Evolutionary Biology. Jun, 2011 | Pubmed ID: 21693066 系统发育的 Gudgeons (Teleostei: 鲤科: Gobioninae)。 Molecular Phylogenetics and Evolution. Oct, 2011 | Pubmed ID: 21672635 Multiple Invasions into Freshwater by Pufferfishes (teleostei: Tetraodontidae): a Mitogenomic Perspective PloS One. Feb, 2011 | Pubmed ID: 21364898 Remarkable Morphological Stasis in an Extant Vertebrate Despite Tens of Millions of Years of Divergence Proceedings. Biological Sciences. Apr, 2011 | Pubmed ID: 20880884 Intron-loss Evolution of Hatching Enzyme Genes in Teleostei BMC Evolutionary Biology. Aug, 2010 | Pubmed ID: 20796321 Transfer RNA Gene Arrangement and Codon Usage in Vertebrate Mitochondrial Genomes: a New Insight into Gene Order Conservation BMC Genomics. Aug, 2010 | Pubmed ID: 20723209 Systematics of the Subfamily Danioninae (Teleostei: Cypriniformes: Cyprinidae) Molecular Phylogenetics and Evolution. Oct, 2010 | Pubmed ID: 20553898 Evolutionary Origin and Phylogeny of the Modern Holocephalans (Chondrichthyes: Chimaeriformes): a Mitogenomic Perspective Molecular Biology and Evolution. Nov, 2010 | Pubmed ID: 20551041 Intraspecific Variation in the Mitochondrial Genome Among Local Populations of Medaka Oryzias Latipes Gene. Jun, 2010 | Pubmed ID: 20193748 Evolutionary History of Anglerfishes (Teleostei: Lophiiformes): a Mitogenomic Perspective BMC Evolutionary Biology. Feb, 2010 | Pubmed ID: 20178642 Biogeography and Evolution of the Carassius Auratus-complex in East Asia BMC Evolutionary Biology. Jan, 2010 | Pubmed ID: 20064277 Deep-ocean Origin of the Freshwater Eels Biology Letters. Jun, 2010 | Pubmed ID: 20053660 Mitochondrial Phylogenomics of Anchovies (family Engraulidae) and Recurrent Origins of Pronounced Miniaturization in the Order Clupeiformes Molecular Phylogenetics and Evolution. Jul, 2010 | Pubmed ID: 19944773 Catostomid 鱼类的亲缘关系 (辐鳍鱼纲: 鲤形目) 基于线粒体 ND4/ND5 基因序列。 Molecular Phylogenetics and Evolution. Mar, 2010 | Pubmed ID: 19527790 Divergence Time of the Two Regional Medaka Populations in Japan As a New Time Scale for Comparative Genomics of Vertebrates Biology Letters. Dec, 2009 | Pubmed ID: 19586967 Mitogenomic Evaluation of the Unique Facial Nerve Pattern As a Phylogenetic Marker Within the Percifom Fishes (Teleostei: Percomorpha) Molecular Phylogenetics and Evolution. Oct, 2009 | Pubmed ID: 19540351 The Historical Biogeography of the Freshwater Knifefishes Using Mitogenomic Approaches: a Mesozoic Origin of the Asian Notopterids (Actinopterygii: Osteoglossomorpha) Molecular Phylogenetics and Evolution. Jun, 2009 | Pubmed ID: 19444960 Deep-sea Mystery Solved: Astonishing Larval Transformations and Extreme Sexual Dimorphism Unite Three Fish Families Biology Letters. Apr, 2009 | Pubmed ID: 19158027 重构的淡水鱼类 — — 地球最多样进化亲缘关系订购鲤形目 (辐鳍鱼纲: Ostariophysi): 使用多核基因位点与线粒体基因组的案例研究。 Molecular Phylogenetics and Evolution. Jun, 2009 | Pubmed ID: 19141325 Explosive Speciation of Takifugu: Another Use of Fugu As a Model System for Evolutionary Biology Molecular Biology and Evolution. Mar, 2009 | Pubmed ID: 19074759 Stickleback Phylogenies Resolved: Evidence from Mitochondrial Genomes and 11 Nuclear Genes Molecular Phylogenetics and Evolution. Feb, 2009 | Pubmed ID: 19027080 Unique Patterns of Pelvic Fin Evolution: a Case Study of Balistoid Fishes (Pisces: Tetraodontiformes) Based on Whole Mitochondrial Genome Sequences Molecular Phylogenetics and Evolution. Jan, 2009 | Pubmed ID: 19010428 Interrelationships of Atherinomorpha (medakas, Flyingfishes, Killifishes, Silversides, and Their Relatives): The First Evidence Based on Whole Mitogenome Sequences Molecular Phylogenetics and Evolution. Nov, 2008 | Pubmed ID: 18771739 Phylogenetic Utility of Two Existing and Four Novel Nuclear Gene Loci in Reconstructing Tree of Life of Ray-finned Fishes: the Order Cypriniformes (Ostariophysi) As a Case Study Gene. Nov, 2008 | Pubmed ID: 18703121 Mitogenomic Evaluation of the Historical Biogeography of Cichlids Toward Reliable Dating of Teleostean Divergences BMC Evolutionary Biology. Jul, 2008 | Pubmed ID: 18651942 A New Perspective on Phylogeny and Evolution of Tetraodontiform Fishes (Pisces: Acanthopterygii) Based on Whole Mitochondrial Genome Sequences: Basal Ecological Diversification? BMC Evolutionary Biology. Jul, 2008 | Pubmed ID: 18638411 Heterotypy in the N-terminal Region of Growth/differentiation Factor 5 (GDF5) Mature Protein During Teleost Evolution Molecular Biology and Evolution. May, 2008 | Pubmed ID: 18296700 Monophyly, Phylogenetic Position and Inter-familial Relationships of the Alepocephaliformes (Teleostei) Based on Whole Mitogenome Sequences Molecular Phylogenetics and Evolution. Jun, 2008 | Pubmed ID: 18262798 Interrelationships of the 11 Gasterosteiform Families (sticklebacks, Pipefishes, and Their Relatives): a New Perspective Based on Whole Mitogenome Sequences from 75 Higher Teleosts Molecular Phylogenetics and Evolution. Jan, 2008 | Pubmed ID: 17709262 Phylogenetic Relationships of Danio Within the Order Cypriniformes: a Framework for Comparative and Evolutionary Studies of a Model Species Journal of Experimental Zoology. Part B, Molecular and Developmental Evolution. Sep, 2007 | Pubmed ID: 17554749 Phylogenetic Position of Tetraodontiform Fishes Within the Higher Teleosts: Bayesian Inferences Based on 44 Whole Mitochondrial Genome Sequences Molecular Phylogenetics and Evolution. Oct, 2007 | Pubmed ID: 17490896 Independent Evolution of the Specialized Pharyngeal Jaw Apparatus in Cichlid and Labrid Fishes BMC Evolutionary Biology. Jan, 2007 | Pubmed ID: 17263894 Phylogenetic Relationships Among Anchovies, Sardines, Herrings and Their Relatives (Clupeiformes), Inferred from Whole Mitogenome Sequences Molecular Phylogenetics and Evolution. Jun, 2007 | Pubmed ID: 17123838 The Mitochondrial Genome of Spotted Green Pufferfish Tetraodon Nigroviridis (Teleostei: Tetraodontiformes) and Divergence Time Estimation Among Model Organisms in Fishes Genes & Genetic Systems. Feb, 2006 | Pubmed ID: 16607039 Round and Pointed-head Grenadier Fishes (Actinopterygii: Gadiformes) Represent a Single Sister Group: Evidence from the Complete Mitochondrial Genome Sequences Molecular Phylogenetics and Evolution. Jul, 2006 | Pubmed ID: 16603389 Molecular Systematics of the Gonorynchiform Fishes (Teleostei) Based on Whole Mitogenome Sequences: Implications for Higher-level Relationships Within the Otocephala Molecular Phylogenetics and Evolution. Oct, 2005 | Pubmed ID: 15890536 Evolution of the Mitochondrial Genome in Cephalochordata As Inferred from Complete Nucleotide Sequences from Two Epigonichthys Species Journal of Molecular Evolution. Apr, 2005 | Pubmed ID: 15883887 The Mitochondrial Genome of Indonesian Coelacanth Latimeria Menadoensis (Sarcopterygii: Coelacanthiformes) and Divergence Time Estimation Between the Two Coelacanths Gene. Apr, 2005 | Pubmed ID: 15777665 Molecular Phylogeny and Evolution of the Freshwater Eels Genus Anguilla Based on the Whole Mitochondrial Genome Sequences Molecular Phylogenetics and Evolution. Jan, 2005 | Pubmed ID: 15579387 PCR-based Approach for Sequencing Mitochondrial Genomes of Decapod Crustaceans, with a Practical Example from Kuruma Prawn (Marsupenaeus Japonicus) Marine Biotechnology (New York, N.Y.). Sep-Oct, 2004 | Pubmed ID: 15791487 Gene Rearrangements and Evolution of TRNA Pseudogenes in the Mitochondrial Genome of the Parrotfish (Teleostei: Perciformes: Scaridae) Journal of Molecular Evolution. Sep, 2004 | Pubmed ID: 15553084 Mitogenomic Evidence for the Monophyly of Elopomorph Fishes (Teleostei) and the Evolutionary Origin of the Leptocephalus Larva Molecular Phylogenetics and Evolution. Jul, 2004 | Pubmed ID: 15186813 Large-scale Gene Rearrangements in the Mitochondrial Genomes of Two Calanoid Copepods Eucalanus Bungii and Neocalanus Cristatus (Crustacea), with Notes on New Versatile Primers for the SrRNA and COI Genes Gene. May, 2004 | Pubmed ID: 15145056 Organization of the Mitochondrial Genome of Antarctic Krill Euphausia Superba (Crustacea: Malacostraca) Marine Biotechnology (New York, N.Y.). May-Jun, 2004 | Pubmed ID: 15136912 Efficiently Resolving the Basal Clades of a Phylogenetic Tree Using Bayesian and Parsimony Approaches: a Case Study Using Mitogenomic Data from 100 Higher Teleost Fishes Molecular Phylogenetics and Evolution. Apr, 2004 | Pubmed ID: 15019630 How Meaningful Are Bayesian Support Values? Molecular Biology and Evolution. Jan, 2004 | Pubmed ID: 14595090 Evolution of the Deep-sea Gulper Eel Mitochondrial Genomes: Large-scale Gene Rearrangements Originated Within the Eels Molecular Biology and Evolution. Nov, 2003 | Pubmed ID: 12949142 Complete Mitochondrial DNA Sequence of the Swimming Crab, Portunus Trituberculatus (Crustacea: Decapoda: Brachyura) Gene. Jun, 2003 | Pubmed ID: 12853147 Basal Euteleostean Relationships: a Mitogenomic Perspective on the Phylogenetic Reality of the "Protacanthopterygii" Molecular Phylogenetics and Evolution. Jun, 2003 | Pubmed ID: 12742752 Mitochondrial Genomics of Ostariophysan Fishes: Perspectives on Phylogeny and Biogeography Journal of Molecular Evolution. Apr, 2003 | Pubmed ID: 12664166 Major Patterns of Higher Teleostean Phylogenies: a New Perspective Based on 100 Complete Mitochondrial DNA Sequences Molecular Phylogenetics and Evolution. Jan, 2003 | Pubmed ID: 12470944 Basal Actinopterygian Relationships: a Mitogenomic Perspective on the Phylogeny of the "ancient Fish" Molecular Phylogenetics and Evolution. Jan, 2003 | Pubmed ID: 12470943 Complete Mitochondrial DNA Sequence of Tigriopus Japonicus (Crustacea: Copepoda) Marine Biotechnology (New York, N.Y.). Sep, 2002 | Pubmed ID: 14961252 Complete Mitochondrial DNA Sequence of the Japanese Spiny Lobster, Panulirus Japonicus (Crustacea: Decapoda) Gene. Jul, 2002 | Pubmed ID: 12242015 V-SINEs: a New Superfamily of Vertebrate SINEs That Are Widespread in Vertebrate Genomes and Retain a Strongly Conserved Segment Within Each Repetitive Unit Genome Research. Feb, 2002 | Pubmed ID: 11827951 滤芯水过滤样品和环境DNA的提取使用 Masaki Miya1, Toshifumi Minamoto2, Hiroki Yamanaka3, Shin-ichiro Oka4, Keiichi Sato4, Satoshi Yamamoto2, Tetsuya Sado1, Hideyuki Doi5 1Department of Ecology and Environmental Sciences, Natural History Museum and Institute, Chiba, 2Graduate School of Human Development and Environment, Kobe University, 3Faculty of Science and Technology, Ryukoku University, 4Okinawa Churashima Research Center, 5Graduate School of Simulation Studies, University of Hyogo Ambiente
滤芯水过滤样品和环境DNA的提取使用 Masaki Miya1, Toshifumi Minamoto2, Hiroki Yamanaka3, Shin-ichiro Oka4, Keiichi Sato4, Satoshi Yamamoto2, Tetsuya Sado1, Hideyuki Doi5 1Department of Ecology and Environmental Sciences, Natural History Museum and Institute, Chiba, 2Graduate School of Human Development and Environment, Kobe University, 3Faculty of Science and Technology, Ryukoku University, 4Okinawa Churashima Research Center, 5Graduate School of Simulation Studies, University of Hyogo Ambiente