Oscar P. Kuipers Department of Molecular Genetics University of Groningen Biography Publications Institution JoVE Articles Oscar P. Kuipers has not added a biography. If you are Oscar P. Kuipers and would like to personalize this page please email our Author Liaison for assistance. Publications Pneumococcal Gene Complex Involved in Resistance to Extracellular Oxidative Stress Infection and Immunity. Mar, 2012 | Pubmed ID: 22215735 Heterologous Protein Expression by Lactococcus Lactis Methods in Molecular Biology (Clifton, N.J.). 2012 | Pubmed ID: 22160898 From Meadows to Milk to Mucosa - Adaptation of Streptococcus and Lactococcus Species to Their Nutritional Environments FEMS Microbiology Reviews. Dec, 2011 | Pubmed ID: 22212109 Time-resolved Transcriptomics and Bioinformatic Analyses Reveal Intrinsic Stress Responses During Batch Culture of Bacillus Subtilis PloS One. 2011 | Pubmed ID: 22087258 Regulation of Arginine Acquisition and Virulence Gene Expression in the Human Pathogen Streptococcus Pneumoniae by Transcription Regulators ArgR1 and AhrC The Journal of Biological Chemistry. Dec, 2011 | Pubmed ID: 22084243 CcpA Ensures Optimal Metabolic Fitness of Streptococcus Pneumoniae PloS One. 2011 | Pubmed ID: 22039538 Determining Sites of Interaction Between Prenisin and Its Modification Enzymes NisB and NisC Molecular Microbiology. Nov, 2011 | Pubmed ID: 22011325 Transcriptional Responses of Bacillus Cereus Towards Challenges with the Polysaccharide Chitosan PloS One. 2011 | Pubmed ID: 21931677 The Response of Lactococcus Lactis to Membrane Protein Production PloS One. 2011 | Pubmed ID: 21904605 The Lcn972 Bacteriocin-encoding Plasmid PBL1 Impairs Cellobiose Metabolism in Lactococcus Lactis Applied and Environmental Microbiology. Nov, 2011 | Pubmed ID: 21890668 Efficient Overproduction of Membrane Proteins in Lactococcus Lactis Requires the Cell Envelope Stress Sensor/regulator Couple CesSR PloS One. 2011 | Pubmed ID: 21818275 CelR-mediated Activation of the Cellobiose-utilization Gene Cluster in Streptococcus Pneumoniae Microbiology (Reading, England). Oct, 2011 | Pubmed ID: 21778207 PSEUDO, a Genetic Integration Standard for Lactococcus Lactis Applied and Environmental Microbiology. Sep, 2011 | Pubmed ID: 21764949 Distinct Roles of ComK1 and ComK2 in Gene Regulation in Bacillus Cereus PloS One. 2011 | Pubmed ID: 21747963 The Cop Operon is Required for Copper Homeostasis and Contributes to Virulence in Streptococcus Pneumoniae Molecular Microbiology. Sep, 2011 | Pubmed ID: 21736642 A Novel Screening System for Secretion of Heterologous Proteins in Bacillus Subtilis Microbial Biotechnology. Sep, 2011 | Pubmed ID: 21624103 Transcriptional Response of Streptococcus Pneumoniae to Zn2+) Limitation and the Repressor/activator Function of AdcR Metallomics : Integrated Biometal Science. Jun, 2011 | Pubmed ID: 21603707 Regulon of the N-acetylglucosamine Utilization Regulator NagR in Bacillus Subtilis Journal of Bacteriology. Jul, 2011 | Pubmed ID: 21602348 Evaluating the Feasibility of Lantibiotics As an Alternative Therapy Against Bacterial Infections in Humans Expert Opinion on Drug Metabolism & Toxicology. Jun, 2011 | Pubmed ID: 21521092 Deletion of a Cation Transporter Promotes Lysis in Streptococcus Pneumoniae Infection and Immunity. Jun, 2011 | Pubmed ID: 21422174 Understanding Microbial Behavior Within and Outside the Host to Improve Food Functionality and Safety Current Opinion in Biotechnology. Apr, 2011 | Pubmed ID: 21334191 Bet Hedging or Not? A Guide to Proper Classification of Microbial Survival Strategies BioEssays : News and Reviews in Molecular, Cellular and Developmental Biology. Mar, 2011 | Pubmed ID: 21254151 Targeting Diseases with Genetically Engineered Lactococcus Lactis and Its Course Towards Medical Translation Expert Opinion on Biological Therapy. Mar, 2011 | Pubmed ID: 21204744 Bacterial Spores in Food: How Phenotypic Variability Complicates Prediction of Spore Properties and Bacterial Behavior Current Opinion in Biotechnology. Apr, 2011 | Pubmed ID: 21134736 Biofilm Formation and Dispersal in Gram-positive Bacteria Current Opinion in Biotechnology. Apr, 2011 | Pubmed ID: 21109420 Rok Regulates YuaB Expression During Architecturally Complex Colony Development of Bacillus Subtilis 168 Journal of Bacteriology. Feb, 2011 | Pubmed ID: 21097620 SpotXplore: a Cytoscape Plugin for Visual Exploration of Hotspot Expression in Gene Regulatory Networks Bioinformatics (Oxford, England). Nov, 2010 | Pubmed ID: 20861033 Towards Enhanced Galactose Utilization by Lactococcus Lactis Applied and Environmental Microbiology. Nov, 2010 | Pubmed ID: 20817811 How Mathematical Modelling Elucidates Signalling in Bacillus Subtilis Molecular Microbiology. Sep, 2010 | Pubmed ID: 20624218 Penicillin-binding Protein Folding is Dependent on the PrsA Peptidyl-prolyl Cis-trans Isomerase in Bacillus Subtilis Molecular Microbiology. Jul, 2010 | Pubmed ID: 20487272 BAGEL2: Mining for Bacteriocins in Genomic Data Nucleic Acids Research. Jul, 2010 | Pubmed ID: 20462861 Genetic Tool Development for a New Host for Biotechnology, the Thermotolerant Bacterium Bacillus Coagulans Applied and Environmental Microbiology. Jun, 2010 | Pubmed ID: 20400555 Copper Stress Affects Iron Homeostasis by Destabilizing Iron-sulfur Cluster Formation in Bacillus Subtilis Journal of Bacteriology. May, 2010 | Pubmed ID: 20233928 Gene Position Within a Long Transcript As a Determinant for Stochastic Switching in Bacteria Molecular Microbiology. Apr, 2010 | Pubmed ID: 20233302 Heterochronic Phosphorelay Gene Expression As a Source of Heterogeneity in Bacillus Subtilis Spore Formation Journal of Bacteriology. Apr, 2010 | Pubmed ID: 20154131 Production of a Class II Two-component Lantibiotic of Streptococcus Pneumoniae Using the Class I Nisin Synthetic Machinery and Leader Sequence Antimicrobial Agents and Chemotherapy. Apr, 2010 | Pubmed ID: 20100873 Adaptation of Hansenula Polymorpha to Methanol: a Transcriptome Analysis BMC Genomics. 2010 | Pubmed ID: 20044946 Generic and Specific Adaptive Responses of Streptococcus Pneumoniae to Challenge with Three Distinct Antimicrobial Peptides, Bacitracin, LL-37, and Nisin Antimicrobial Agents and Chemotherapy. Jan, 2010 | Pubmed ID: 19917758 Response of Bacillus Cereus ATCC 14579 to Challenges with Sublethal Concentrations of Enterocin AS-48 BMC Microbiology. 2009 | Pubmed ID: 19863785 Mechanisms and Evolution of Control Logic in Prokaryotic Transcriptional Regulation Microbiology and Molecular Biology Reviews : MMBR. Sep, 2009 | Pubmed ID: 19721087 Directionality and Coordination of Dehydration and Ring Formation During Biosynthesis of the Lantibiotic Nisin The Journal of Biological Chemistry. Sep, 2009 | Pubmed ID: 19620240 Ubiquitous Late Competence Genes in Bacillus Species Indicate the Presence of Functional DNA Uptake Machineries Environmental Microbiology. Aug, 2009 | Pubmed ID: 19453701 Subcellular Localization of TatAd of Bacillus Subtilis Depends on the Presence of TatCd or TatCy Journal of Bacteriology. Jul, 2009 | Pubmed ID: 19395490 Effects of Altered TatC Proteins on Protein Secretion Efficiency Via the Twin-arginine Translocation Pathway of Bacillus Subtilis Microbiology (Reading, England). Jun, 2009 | Pubmed ID: 19383693 Strain-specific Impact of PsaR of Streptococcus Pneumoniae on Global Gene Expression and Virulence Microbiology (Reading, England). May, 2009 | Pubmed ID: 19372167 MOTIFATOR: Detection and Characterization of Regulatory Motifs Using Prokaryote Transcriptome Data Bioinformatics (Oxford, England). Feb, 2009 | Pubmed ID: 19168910 Copper Acquisition is Mediated by YcnJ and Regulated by YcnK and CsoR in Bacillus Subtilis Journal of Bacteriology. Apr, 2009 | Pubmed ID: 19168619 Characterization of the Individual Glucose Uptake Systems of Lactococcus Lactis: Mannose-PTS, Cellobiose-PTS and the Novel GlcU Permease Molecular Microbiology. Feb, 2009 | Pubmed ID: 19054326 The Twin-arginine Translocation (Tat) Systems from Bacillus Subtilis Display a Conserved Mode of Complex Organization and Similar Substrate Recognition Requirements The FEBS Journal. Jan, 2009 | Pubmed ID: 19049517 MINOMICS: Visualizing Prokaryote Transcriptomics and Proteomics Data in a Genomic Context Bioinformatics (Oxford, England). Jan, 2009 | Pubmed ID: 19008250 Relaxed Specificity of the Bacillus Subtilis TatAdCd Translocase in Tat-dependent Protein Secretion Journal of Bacteriology. Jan, 2009 | Pubmed ID: 18978042 Induction of Natural Competence in Bacillus Cereus ATCC14579 Microbial Biotechnology. May, 2008 | Pubmed ID: 21261842 DISCLOSE : DISsection of CLusters Obtained by SEries of Transcriptome Data Using Functional Annotations and Putative Transcription Factor Binding Sites BMC Bioinformatics. 2008 | Pubmed ID: 19087282 Optimization of Protein Secretion by Bacillus Subtilis Recent Patents on Biotechnology. 2008 | Pubmed ID: 19075856 Prosecutor: Parameter-free Inference of Gene Function for Prokaryotes Using DNA Microarray Data, Genomic Context and Multiple Gene Annotation Sources BMC Genomics. 2008 | Pubmed ID: 18939968 The ABC-type Multidrug Resistance Transporter LmrCD is Responsible for an Extrusion-based Mechanism of Bile Acid Resistance in Lactococcus Lactis Journal of Bacteriology. Nov, 2008 | Pubmed ID: 18790870 9th International Symposium on Lactic Acid Bacteria Applied and Environmental Microbiology. Aug, 2008 | Pubmed ID: 18586976 Improvement of Lactobacillus Plantarum Aerobic Growth As Directed by Comprehensive Transcriptome Analysis Applied and Environmental Microbiology. Aug, 2008 | Pubmed ID: 18539801 Influence of Shifting Positions of Ser, Thr, and Cys Residues in Prenisin on the Efficiency of Modification Reactions and on the Antimicrobial Activities of the Modified Prepeptides Applied and Environmental Microbiology. Aug, 2008 | Pubmed ID: 18539792 Reduced Lysis Upon Growth of Lactococcus Lactis on Galactose is a Consequence of Decreased Binding of the Autolysin AcmA Applied and Environmental Microbiology. Aug, 2008 | Pubmed ID: 18539791 Transcriptome Analysis of the Lactococcus Lactis ArgR and AhrC Regulons Applied and Environmental Microbiology. Aug, 2008 | Pubmed ID: 18539789 Bistability, Epigenetics, and Bet-hedging in Bacteria Annual Review of Microbiology. 2008 | Pubmed ID: 18537474 Increased D-alanylation of Lipoteichoic Acid and a Thickened Septum Are Main Determinants in the Nisin Resistance Mechanism of Lactococcus Lactis Microbiology (Reading, England). Jun, 2008 | Pubmed ID: 18524930 Opposite Effects of Mn2+ and Zn2+ on PsaR-mediated Expression of the Virulence Genes PcpA, PrtA, and PsaBCA of Streptococcus Pneumoniae Journal of Bacteriology. Aug, 2008 | Pubmed ID: 18515418 LysM, a Widely Distributed Protein Motif for Binding to (peptido)glycans Molecular Microbiology. May, 2008 | Pubmed ID: 18430080 The Relative Value of Operon Predictions Briefings in Bioinformatics. Sep, 2008 | Pubmed ID: 18420711 Assessment of CcpA-mediated Catabolite Control of Gene Expression in Bacillus Cereus ATCC 14579 BMC Microbiology. 2008 | Pubmed ID: 18416820 Transient Heterogeneity in Extracellular Protease Production by Bacillus Subtilis Molecular Systems Biology. 2008 | Pubmed ID: 18414485 Bet-hedging and Epigenetic Inheritance in Bacterial Cell Development Proceedings of the National Academy of Sciences of the United States of America. Mar, 2008 | Pubmed ID: 18326026 Supervised Lowess Normalization of Comparative Genome Hybridization Data--application to Lactococcal Strain Comparisons BMC Bioinformatics. 2008 | Pubmed ID: 18267014 Site-specific Contributions of Glutamine-dependent Regulator GlnR and GlnR-regulated Genes to Virulence of Streptococcus Pneumoniae Infection and Immunity. Mar, 2008 | Pubmed ID: 18174343 A Facile Reporter System for the Experimental Identification of Twin-arginine Translocation (Tat) Signal Peptides from All Kingdoms of Life Journal of Molecular Biology. Jan, 2008 | Pubmed ID: 18054046 The Escherichia Coli TatABC System and a Bacillus Subtilis TatAC-type System Recognise Three Distinct Targeting Determinants in Twin-arginine Signal Peptides Journal of Molecular Biology. Jan, 2008 | Pubmed ID: 18036542 A Minimal Tat System from a Gram-positive Organism: a Bifunctional TatA Subunit Participates in Discrete TatAC and TatA Complexes The Journal of Biological Chemistry. Feb, 2008 | Pubmed ID: 18029357 CodY of Streptococcus Pneumoniae: Link Between Nutritional Gene Regulation and Colonization Journal of Bacteriology. Jan, 2008 | Pubmed ID: 18024519 LmrR is a Transcriptional Repressor of Expression of the Multidrug ABC Transporter LmrCD in Lactococcus Lactis Journal of Bacteriology. Jan, 2008 | Pubmed ID: 17993533 NisC, the Cyclase of the Lantibiotic Nisin, Can Catalyze Cyclization of Designed Nonlantibiotic Peptides Biochemistry. Nov, 2007 | Pubmed ID: 17929939 MOVE: a Multi-level Ontology-based Visualization and Exploration Framework for Genomic Networks In Silico Biology. 2007 | Pubmed ID: 17688427 Dissection and Modulation of the Four Distinct Activities of Nisin by Mutagenesis of Rings A and B and by C-terminal Truncation Applied and Environmental Microbiology. Sep, 2007 | Pubmed ID: 17660303 The Novel Transcriptional Regulator SczA Mediates Protection Against Zn2+ Stress by Activation of the Zn2+-resistance Gene CzcD in Streptococcus Pneumoniae Molecular Microbiology. Aug, 2007 | Pubmed ID: 17640279 Search for Genes Essential for Pneumococcal Transformation: the RADA DNA Repair Protein Plays a Role in Genomic Recombination of Donor DNA Journal of Bacteriology. Sep, 2007 | Pubmed ID: 17631629 Production and Secretion Stress Caused by Overexpression of Heterologous Alpha-amylase Leads to Inhibition of Sporulation and a Prolonged Motile Phase in Bacillus Subtilis Applied and Environmental Microbiology. Aug, 2007 | Pubmed ID: 17586671 Temporal Separation of Distinct Differentiation Pathways by a Dual Specificity Rap-Phr System in Bacillus Subtilis Molecular Microbiology. Jul, 2007 | Pubmed ID: 17581123 Identification of a Novel Streptococcal Gene Cassette Mediating SOS Mutagenesis in Streptococcus Uberis Journal of Bacteriology. Jul, 2007 | Pubmed ID: 17513475 Cell Envelope Stress Induced by the Bacteriocin Lcn972 is Sensed by the Lactococcal Two-component System CesSR Molecular Microbiology. Apr, 2007 | Pubmed ID: 17493129 Antirepression As a Second Mechanism of Transcriptional Activation by a Minor Groove Binding Protein Molecular Microbiology. Apr, 2007 | Pubmed ID: 17493123 SpxB Regulates O-acetylation-dependent Resistance of Lactococcus Lactis Peptidoglycan to Hydrolysis The Journal of Biological Chemistry. Jul, 2007 | Pubmed ID: 17485463 A Single, Specific Thymine Mutation in the ComK-binding Site Severely Decreases Binding and Transcription Activation by the Competence Transcription Factor ComK of Bacillus Subtilis Journal of Bacteriology. Jul, 2007 | Pubmed ID: 17468244 The Iturin and Fengycin Families of Lipopeptides Are Key Factors in Antagonism of Bacillus Subtilis Toward Podosphaera Fusca Molecular Plant-microbe Interactions : MPMI. Apr, 2007 | Pubmed ID: 17427813 Novel Methods for Genetic Transformation of Natural Bacillus Subtilis Isolates Used to Study the Regulation of the Mycosubtilin and Surfactin Synthetases Applied and Environmental Microbiology. Jun, 2007 | Pubmed ID: 17416694 Complete Genome Sequence of the Prototype Lactic Acid Bacterium Lactococcus Lactis Subsp. Cremoris MG1363 Journal of Bacteriology. Apr, 2007 | Pubmed ID: 17307855 A Derepression System Based on the Bacillus Subtilis Sporulation Pathway Offers Dynamic Control of Heterologous Gene Expression Applied and Environmental Microbiology. Apr, 2007 | Pubmed ID: 17293533 Development of Genomic Array Footprinting for Identification of Conditionally Essential Genes in Streptococcus Pneumoniae Applied and Environmental Microbiology. Mar, 2007 | Pubmed ID: 17261526 Production of Dehydroamino Acid-containing Peptides by Lactococcus Lactis Applied and Environmental Microbiology. Mar, 2007 | Pubmed ID: 17261515 FIVA: Functional Information Viewer and Analyzer Extracting Biological Knowledge from Transcriptome Data of Prokaryotes Bioinformatics (Oxford, England). May, 2007 | Pubmed ID: 17237043 Changing a Single Amino Acid in Clostridium Perfringens Beta-toxin Affects the Efficiency of Heterologous Secretion by Bacillus Subtilis Applied and Environmental Microbiology. Mar, 2007 | Pubmed ID: 17209068 Transcriptome Analysis of Temporal Regulation of Carbon Metabolism by CcpA in Bacillus Subtilis Reveals Additional Target Genes Journal of Molecular Microbiology and Biotechnology. 2007 | Pubmed ID: 17183215 Regulation of Gene Expression in Streptococcus Pneumoniae by Response Regulator 09 is Strain Dependent Journal of Bacteriology. Feb, 2007 | Pubmed ID: 17085554 Time-resolved Determination of the CcpA Regulon of Lactococcus Lactis Subsp. Cremoris MG1363 Journal of Bacteriology. Feb, 2007 | Pubmed ID: 17028270 Heterologous Production and Secretion of Clostridium Perfringens Beta-toxoid in Closely Related Gram-positive Hosts Journal of Biotechnology. Jan, 2007 | Pubmed ID: 16959352 A Disulfide Bond-containing Alkaline Phosphatase Triggers a BdbC-dependent Secretion Stress Response in Bacillus Subtilis Applied and Environmental Microbiology. Nov, 2006 | Pubmed ID: 17088376 Sec-mediated Transport of Posttranslationally Dehydrated Peptides in Lactococcus Lactis Applied and Environmental Microbiology. Dec, 2006 | Pubmed ID: 17041158 Iron Starvation Triggers the Stringent Response and Induces Amino Acid Biosynthesis for Bacillibactin Production in Bacillus Subtilis Journal of Bacteriology. Dec, 2006 | Pubmed ID: 17012385 Different Subcellular Locations of Secretome Components of Gram-positive Bacteria Microbiology (Reading, England). Oct, 2006 | Pubmed ID: 17005968 The Alpha-phosphoglucomutase of Lactococcus Lactis is Unrelated to the Alpha-D-phosphohexomutase Superfamily and is Encoded by the Essential Gene PgmH The Journal of Biological Chemistry. Dec, 2006 | Pubmed ID: 16980299 An Alternative Bactericidal Mechanism of Action for Lantibiotic Peptides That Target Lipid II Science (New York, N.Y.). Sep, 2006 | Pubmed ID: 16973881 LmrCD is a Major Multidrug Resistance Transporter in Lactococcus Lactis Molecular Microbiology. Aug, 2006 | Pubmed ID: 16879641 BAGEL: a Web-based Bacteriocin Genome Mining Tool Nucleic Acids Research. Jul, 2006 | Pubmed ID: 16845009 Natural Sweetening of Food Products by Engineering Lactococcus Lactis for Glucose Production Metabolic Engineering. Sep, 2006 | Pubmed ID: 16844396 GlnR-mediated Regulation of Nitrogen Metabolism in Lactococcus Lactis Journal of Bacteriology. Jul, 2006 | Pubmed ID: 16788206 Regulation of Glutamine and Glutamate Metabolism by GlnR and GlnA in Streptococcus Pneumoniae The Journal of Biological Chemistry. Sep, 2006 | Pubmed ID: 16787930 Transcriptome Analysis Reveals Mechanisms by Which Lactococcus Lactis Acquires Nisin Resistance Antimicrobial Agents and Chemotherapy. May, 2006 | Pubmed ID: 16641446 Identification and Functional Characterization of the Lactococcus Lactis CodY-regulated Branched-chain Amino Acid Permease BcaP (CtrA) Journal of Bacteriology. May, 2006 | Pubmed ID: 16621821 SIMAGE: Simulation of DNA-microarray Gene Expression Data BMC Bioinformatics. 2006 | Pubmed ID: 16613602 Effects of Phosphorelay Perturbations on Architecture, Sporulation, and Spore Resistance in Biofilms of Bacillus Subtilis Journal of Bacteriology. Apr, 2006 | Pubmed ID: 16585769 Phenotypic Variation in Bacteria: the Role of Feedback Regulation Nature Reviews. Microbiology. Apr, 2006 | Pubmed ID: 16541134 Transformation of Undomesticated Strains of Bacillus Subtilis by Protoplast Electroporation Journal of Microbiological Methods. Sep, 2006 | Pubmed ID: 16503058 Functional Analysis of the Competence Transcription Factor ComK of Bacillus Subtilis by Characterization of Truncation Variants Microbiology (Reading, England). Feb, 2006 | Pubmed ID: 16436435 To Have Neighbour's Fare: Extending the Molecular Toolbox for Streptococcus Pneumoniae Microbiology (Reading, England). Feb, 2006 | Pubmed ID: 16436423 Mucosal Vaccine Delivery of Antigens Tightly Bound to an Adjuvant Particle Made from Food-grade Bacteria Methods (San Diego, Calif.). Feb, 2006 | Pubmed ID: 16414272 Novel Surface Display System for Proteins on Non-genetically Modified Gram-positive Bacteria Applied and Environmental Microbiology. Jan, 2006 | Pubmed ID: 16391130 Expression of Transcription Activator ComK of Bacillus Subtilis in the Heterologous Host Lactococcus Lactis Leads to a Genome-wide Repression Pattern: a Case Study of Horizontal Gene Transfer Applied and Environmental Microbiology. Jan, 2006 | Pubmed ID: 16391071 Development and Characterization of a Subtilin-regulated Expression System in Bacillus Subtilis: Strict Control of Gene Expression by Addition of Subtilin Applied and Environmental Microbiology. Dec, 2005 | Pubmed ID: 16332878 Post-translational Modification of Therapeutic Peptides by NisB, the Dehydratase of the Lantibiotic Nisin Biochemistry. Sep, 2005 | Pubmed ID: 16171398 The Lactococcus Lactis CodY Regulon: Identification of a Conserved Cis-regulatory Element The Journal of Biological Chemistry. Oct, 2005 | Pubmed ID: 16040604 Projector 2: Contig Mapping for Efficient Gap-closure of Prokaryotic Genome Sequence Assemblies Nucleic Acids Research. Jul, 2005 | Pubmed ID: 15980536 Lantibiotic Structures As Guidelines for the Design of Peptides That Can Be Modified by Lantibiotic Enzymes Biochemistry. Jun, 2005 | Pubmed ID: 15952794 AcmA of Lactococcus Lactis is an N-acetylglucosaminidase with an Optimal Number of LysM Domains for Proper Functioning The FEBS Journal. Jun, 2005 | Pubmed ID: 15943817 Lactic Acid Bacteria - Genetics, Metabolism and Application FEMS Microbiology Reviews. Aug, 2005 | Pubmed ID: 15939504 Overview on Sugar Metabolism and Its Control in Lactococcus Lactis - the Input from in Vivo NMR FEMS Microbiology Reviews. Aug, 2005 | Pubmed ID: 15939503 Tricksy Business: Transcriptome Analysis Reveals the Involvement of Thioredoxin A in Redox Homeostasis, Oxidative Stress, Sulfur Metabolism, and Cellular Differentiation in Bacillus Subtilis Journal of Bacteriology. Jun, 2005 | Pubmed ID: 15937154 Comparative and Functional Genomics of Lactococci FEMS Microbiology Reviews. Aug, 2005 | Pubmed ID: 15936843 Phosphatases Modulate the Bistable Sporulation Gene Expression Pattern in Bacillus Subtilis Molecular Microbiology. Jun, 2005 | Pubmed ID: 15916600 A Generally Applicable Validation Scheme for the Assessment of Factors Involved in Reproducibility and Quality of DNA-microarray Data BMC Genomics. 2005 | Pubmed ID: 15907200 Fructose Utilization in Lactococcus Lactis As a Model for Low-GC Gram-positive Bacteria: Its Regulator, Signal, and DNA-binding Site Journal of Bacteriology. Jun, 2005 | Pubmed ID: 15901699 Stripping Bacillus: ComK Auto-stimulation is Responsible for the Bistable Response in Competence Development Molecular Microbiology. May, 2005 | Pubmed ID: 15819618 Interaction Between ArgR and AhrC Controls Regulation of Arginine Metabolism in Lactococcus Lactis The Journal of Biological Chemistry. May, 2005 | Pubmed ID: 15749710 The Rok Protein of Bacillus Subtilis Represses Genes for Cell Surface and Extracellular Functions Journal of Bacteriology. Mar, 2005 | Pubmed ID: 15743949 Probing Direct Interactions Between CodY and the OppD Promoter of Lactococcus Lactis Journal of Bacteriology. Jan, 2005 | Pubmed ID: 15629923 Autolysis of Lactococcus Lactis is Increased Upon D-alanine Depletion of Peptidoglycan and Lipoteichoic Acids Journal of Bacteriology. Jan, 2005 | Pubmed ID: 15601695 Visualization of Differential Gene Expression by Improved Cyan Fluorescent Protein and Yellow Fluorescent Protein Production in Bacillus Subtilis Applied and Environmental Microbiology. Nov, 2004 | Pubmed ID: 15528548 Resistance of Gram-positive Bacteria to Nisin is Not Determined by Lipid II Levels FEMS Microbiology Letters. Oct, 2004 | Pubmed ID: 15451114 Autoregulation of Subtilin Biosynthesis in Bacillus Subtilis: the Role of the Spa-box in Subtilin-responsive Promoters Peptides. Sep, 2004 | Pubmed ID: 15374645 Subcellular Sites for Bacterial Protein Export Molecular Microbiology. Sep, 2004 | Pubmed ID: 15341641 Proteomics of Protein Secretion by Bacillus Subtilis: Separating the "secrets" of the Secretome Microbiology and Molecular Biology Reviews : MMBR. Jun, 2004 | Pubmed ID: 15187182 Genome2D: a Visualization Tool for the Rapid Analysis of Bacterial Transcriptome Data Genome Biology. 2004 | Pubmed ID: 15128451 Molecular Genetics Information System (MOLGENIS): Alternatives in Developing Local Experimental Genomics Databases Bioinformatics (Oxford, England). Sep, 2004 | Pubmed ID: 15059831 Sugar Utilisation and Conservation of the Gal-lac Gene Cluster in Streptococcus Thermophilus Systematic and Applied Microbiology. Feb, 2004 | Pubmed ID: 15053316 NisT, the Transporter of the Lantibiotic Nisin, Can Transport Fully Modified, Dehydrated, and Unmodified Prenisin and Fusions of the Leader Peptide with Non-lantibiotic Peptides The Journal of Biological Chemistry. May, 2004 | Pubmed ID: 15044440 ArgR and AhrC Are Both Required for Regulation of Arginine Metabolism in Lactococcus Lactis Journal of Bacteriology. Feb, 2004 | Pubmed ID: 14762010 Differential Expression of Two Paralogous Genes of Bacillus Subtilis Encoding Single-stranded DNA Binding Protein Journal of Bacteriology. Feb, 2004 | Pubmed ID: 14762004 MicroPreP: a CDNA Microarray Data Pre-processing Framework Applied Bioinformatics. 2003 | Pubmed ID: 15130795 Projector: Automatic Contig Mapping for Gap Closure Purposes Nucleic Acids Research. Nov, 2003 | Pubmed ID: 14602937 Functional Analysis of the Gene Cluster Involved in Production of the Bacteriocin Circularin A by Clostridium Beijerinckii ATCC 25752 Applied and Environmental Microbiology. Oct, 2003 | Pubmed ID: 14532033 Genome Engineering Reveals Large Dispensable Regions in Bacillus Subtilis Molecular Biology and Evolution. Dec, 2003 | Pubmed ID: 12949151 UniFrag and GenomePrimer: Selection of Primers for Genome-wide Production of Unique Amplicons Bioinformatics (Oxford, England). Aug, 2003 | Pubmed ID: 12912842 The Extracellular Proteome of Bacillus Subtilis Under Secretion Stress Conditions Molecular Microbiology. Jul, 2003 | Pubmed ID: 12823817 Novel Mechanism of Bacteriocin Secretion and Immunity Carried out by Lactococcal Multidrug Resistance Proteins The Journal of Biological Chemistry. Sep, 2003 | Pubmed ID: 12801935 Cell Wall Attachment of a Widely Distributed Peptidoglycan Binding Domain is Hindered by Cell Wall Constituents The Journal of Biological Chemistry. Jun, 2003 | Pubmed ID: 12684515 Controlling Competence in Bacillus Subtilis: Shared Use of Regulators Microbiology (Reading, England). Jan, 2003 | Pubmed ID: 12576575 Complete Genome Sequence of Lactobacillus Plantarum WCFS1 Proceedings of the National Academy of Sciences of the United States of America. Feb, 2003 | Pubmed ID: 12566566 Improving the Predictive Value of the Competence Transcription Factor (ComK) Binding Site in Bacillus Subtilis Using a Genomic Approach Nucleic Acids Research. Dec, 2002 | Pubmed ID: 12490720 Transcriptome Analysis and Related Databases of Lactococcus Lactis Antonie Van Leeuwenhoek. Aug, 2002 | Pubmed ID: 12369183 A Novel Class of Heat and Secretion Stress-responsive Genes is Controlled by the Autoregulated CssRS Two-component System of Bacillus Subtilis Journal of Bacteriology. Oct, 2002 | Pubmed ID: 12270824 Regulation of the MetC-cysK Operon, Involved in Sulfur Metabolism in Lactococcus Lactis Journal of Bacteriology. Jan, 2002 | Pubmed ID: 11741847 Plant-Microbe Interaction: Transcriptional Response of Bacillus Mycoides to Potato Root Exudates Yanglei Yi1, Zhibo Li1, Oscar P. Kuipers1 1Department of Molecular Genetics, University of Groningen JoVE 57606 Biologia Antimicrobial Peptides Produced by Selective Pressure Incorporation of Non-canonical Amino Acids Jessica H. Nickling*1, Tobias Baumann*1, Franz-Josef Schmitt2, Maike Bartholomae3, Oscar P. Kuipers3, Thomas Friedrich2, Nediljko Budisa1 1Department of Biocatalysis, Institute of Chemistry, Technische Universität Berlin, 2Department of Bioenergetics, Institute of Chemistry, Technische Universität Berlin, 3Molecular Genetics Group, Groningen Biomolecular Sciences and Biotechnology Institute, Department of Molecular Genetics, University of Groningen JoVE 57551 Bioingegneria A Fast and Reliable Pipeline for Bacterial Transcriptome Analysis Case study: Serine-dependent Gene Regulation in Streptococcus pneumoniae Muhammad Afzal1,2, Irfan Manzoor1,2, Oscar P. Kuipers1 1Department of Molecular Genetics, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, 2Department of Bioinformatics and Biotechnology, Government College University Faisalabad JoVE 52649 Biologia Live Cell Imaging of Bacillus subtilis and Streptococcus pneumoniae using Automated Time-lapse Microscopy Imke G. de Jong1, Katrin Beilharz1, Oscar P. Kuipers1, Jan- Willem Veening1 1Molecular Genetics Group, Groningen Biomolecular Sciences and Biotechnology Institute, Centre for Synthetic Biology, University of Groningen JoVE 3145 Immunologia e infezioni
Plant-Microbe Interaction: Transcriptional Response of Bacillus Mycoides to Potato Root Exudates Yanglei Yi1, Zhibo Li1, Oscar P. Kuipers1 1Department of Molecular Genetics, University of Groningen JoVE 57606 Biologia
Antimicrobial Peptides Produced by Selective Pressure Incorporation of Non-canonical Amino Acids Jessica H. Nickling*1, Tobias Baumann*1, Franz-Josef Schmitt2, Maike Bartholomae3, Oscar P. Kuipers3, Thomas Friedrich2, Nediljko Budisa1 1Department of Biocatalysis, Institute of Chemistry, Technische Universität Berlin, 2Department of Bioenergetics, Institute of Chemistry, Technische Universität Berlin, 3Molecular Genetics Group, Groningen Biomolecular Sciences and Biotechnology Institute, Department of Molecular Genetics, University of Groningen JoVE 57551 Bioingegneria
A Fast and Reliable Pipeline for Bacterial Transcriptome Analysis Case study: Serine-dependent Gene Regulation in Streptococcus pneumoniae Muhammad Afzal1,2, Irfan Manzoor1,2, Oscar P. Kuipers1 1Department of Molecular Genetics, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, 2Department of Bioinformatics and Biotechnology, Government College University Faisalabad JoVE 52649 Biologia
Live Cell Imaging of Bacillus subtilis and Streptococcus pneumoniae using Automated Time-lapse Microscopy Imke G. de Jong1, Katrin Beilharz1, Oscar P. Kuipers1, Jan- Willem Veening1 1Molecular Genetics Group, Groningen Biomolecular Sciences and Biotechnology Institute, Centre for Synthetic Biology, University of Groningen JoVE 3145 Immunologia e infezioni