Quanhu Sheng Department of Cancer Biology Vanderbilt University School of Medicine Biography Publications Institution JoVE Articles Quanhu Sheng has not added a biography. If you are Quanhu Sheng and would like to personalize this page please email our Author Liaison for assistance. Publications RNA Sequencing of Formalin-Fixed, Paraffin-Embedded Specimens for Gene Expression Quantification and Data Mining International Journal of Genomics. 2016 | Pubmed ID: 27774452 Multi-perspective Quality Control of Illumina RNA Sequencing Data Analysis Briefings in Functional Genomics. Sep, 2016 | Pubmed ID: 27687708 Heterozygosity Ratio, a Robust Global Genomic Measure of Autozygosity and Its Association with Height and Disease Risk Genetics. Aug, 2016 | Pubmed ID: 27585849 LncRNA Expression in the Auditory Forebrain During Postnatal Development Gene. Nov, 2016 | Pubmed ID: 27544636 High-Resolution Mapping of RNA Polymerases Identifies Mechanisms of Sensitivity and Resistance to BET Inhibitors in T(8;21) AML Cell Reports. Aug, 2016 | Pubmed ID: 27498870 Performance Investigation of Proteomic Identification by HCD/CID Fragmentations in Combination with High/Low-Resolution Detectors on a Tribrid, High-Field Orbitrap Instrument PloS One. 2016 | Pubmed ID: 27472422 Practicability of Detecting Somatic Point Mutation from RNA High Throughput Sequencing Data Genomics. May, 2016 | Pubmed ID: 27046520 RNAseq by Total RNA Library Identifies Additional RNAs Compared to Poly(A) RNA Library BioMed Research International. 2015 | Pubmed ID: 26543871 Transfer RNA Detection by Small RNA Deep Sequencing and Disease Association with Myelodysplastic Syndromes BMC Genomics. Sep, 2015 | Pubmed ID: 26400237 Optimization of Search Engines and Postprocessing Approaches to Maximize Peptide and Protein Identification for High-Resolution Mass Data Journal of Proteome Research. Nov, 2015 | Pubmed ID: 26390080 Monitoring Newly Synthesized Proteins over the Adult Life Span of Caenorhabditis Elegans Journal of Proteome Research. Mar, 2015 | Pubmed ID: 25686393 Preprocessing Significantly Improves the Peptide/protein Identification Sensitivity of High-resolution Isobarically Labeled Tandem Mass Spectrometry Data Molecular & Cellular Proteomics : MCP. Feb, 2015 | Pubmed ID: 25435543 RNAseqPS: A Web Tool for Estimating Sample Size and Power for RNAseq Experiment Cancer Informatics. 2014 | Pubmed ID: 25374457 Detection of Internal Exon Deletion with Exon Del BMC Bioinformatics. Oct, 2014 | Pubmed ID: 25322818 Illumina Human Exome Genotyping Array Clustering and Quality Control Nature Protocols. Nov, 2014 | Pubmed ID: 25321409 ICan: an Optimized Ion-current-based Quantification Procedure with Enhanced Quantitative Accuracy and Sensitivity in Biomarker Discovery Journal of Proteome Research. Dec, 2014 | Pubmed ID: 25285707 DupChecker: a Bioconductor Package for Checking High-throughput Genomic Data Redundancy in Meta-analysis BMC Bioinformatics. Sep, 2014 | Pubmed ID: 25267467 Advanced Heat Map and Clustering Analysis Using Heatmap3 BioMed Research International. 2014 | Pubmed ID: 25143956 MultiRankSeq: Multiperspective Approach for RNAseq Differential Expression Analysis and Quality Control BioMed Research International. 2014 | Pubmed ID: 24977143 O18Quant: a Semiautomatic Strategy for Quantitative Analysis of High-resolution 16O/18O Labeled Data BioMed Research International. 2014 | Pubmed ID: 24901003 Multi-perspective Quality Control of Illumina Exome Sequencing Data Using QC3 Genomics. May-Jun, 2014 | Pubmed ID: 24703969 Systematic Assessment of Survey Scan and MS2-based Abundance Strategies for Label-free Quantitative Proteomics Using High-resolution MS Data Journal of Proteome Research. Apr, 2014 | Pubmed ID: 24635752 Very Low-level Heteroplasmy MtDNA Variations Are Inherited in Humans Journal of Genetics and Genomics = Yi Chuan Xue Bao. Dec, 2013 | Pubmed ID: 24377867 Large Scale Comparison of Gene Expression Levels by Microarrays and RNAseq Using TCGA Data PloS One. 2013 | Pubmed ID: 23977046 Serum Proteome Changes in Healthy Subjects with Different Genotypes of NOS1AP in the Chinese Population Journal of Diabetes Research. 2013 | Pubmed ID: 23671866 Delicate Analysis of Post-translational Modifications on Dishevelled 3 Journal of Proteome Research. Jul, 2012 | Pubmed ID: 22612246 BuildSummary: Using a Group-based Approach to Improve the Sensitivity of Peptide/protein Identification in Shotgun Proteomics Journal of Proteome Research. Mar, 2012 | Pubmed ID: 22217156 SRMBuilder: a User-friendly Tool for Selected Reaction Monitoring Data Analysis Journal of Bioinformatics and Computational Biology. Dec, 2011 | Pubmed ID: 22144253 Proteomic Changes in the Photoreceptor Outer Segment Upon Intense Light Exposure Journal of Proteome Research. Feb, 2010 | Pubmed ID: 20020778 A Bayesian Approach to Protein Inference Problem in Shotgun Proteomics Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. Aug, 2009 | Pubmed ID: 19645593 A Platform to Standardize, Store, and Visualize Proteomics Experimental Data Acta Biochimica Et Biophysica Sinica. Apr, 2009 | Pubmed ID: 19352541 On the Estimation of False Positives in Peptide Identifications Using Decoy Search Strategy Proteomics. Jan, 2009 | Pubmed ID: 19053142 ProteinQuant Suite: a Bundle of Automated Software Tools for Label-free Quantitative Proteomics Rapid Communications in Mass Spectrometry : RCM. Dec, 2008 | Pubmed ID: 18985620 A Computational Approach to Characterizing Bond Linkages of Glycan Isomers Using Matrix-assisted Laser Desorption/ionization Tandem Time-of-flight Mass Spectrometry Rapid Communications in Mass Spectrometry : RCM. Nov, 2008 | Pubmed ID: 18853404 Quantitative Comparison of Sarcomeric Phosphoproteomes of Neonatal and Adult Rat Hearts American Journal of Physiology. Heart and Circulatory Physiology. Aug, 2008 | Pubmed ID: 18552161 Fast and Accurate Identification of Semi-tryptic Peptides in Shotgun Proteomics Bioinformatics (Oxford, England). Jan, 2008 | Pubmed ID: 18033797 Isolation of High-density Lipoproteins for Non-coding Small RNA Quantification Danielle L. Michell*1, Ryan M. Allen*1, Stuart R. Landstreet1, Shilin Zhao2, Cynthia L. Toth1, Quanhu Sheng3, Kasey C. Vickers1,2 1Department of Medicine, Vanderbilt University School of Medicine, 2Center for Quantitative Sciences, Vanderbilt University School of Medicine, 3Department of Cancer Biology, Vanderbilt University School of Medicine JoVE 54488 Biochimica
Isolation of High-density Lipoproteins for Non-coding Small RNA Quantification Danielle L. Michell*1, Ryan M. Allen*1, Stuart R. Landstreet1, Shilin Zhao2, Cynthia L. Toth1, Quanhu Sheng3, Kasey C. Vickers1,2 1Department of Medicine, Vanderbilt University School of Medicine, 2Center for Quantitative Sciences, Vanderbilt University School of Medicine, 3Department of Cancer Biology, Vanderbilt University School of Medicine JoVE 54488 Biochimica