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Cancer Research

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JoVE Journal Cancer Research
Performing Data Mining And Integrative Analysis Of Biomarker in Breast Cancer Using Multiple Publicly Accessible Databases
 

Performing Data Mining And Integrative Analysis Of Biomarker in Breast Cancer Using Multiple Publicly Accessible Databases

Article DOI: 10.3791/59238-v • 07:41 min • May 17th, 2019
May 17th, 2019 •
1, 2, 3, 3, 3, 3, 3, 1, 1
1Department of Thyroid and Breast Surgery, First Affiliated Hospital of Shantou University Medical College, 2Department of Medical Oncology, Cancer Hospital of Shantou University Medical College, 3Shantou University Medical College

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Here, we present a protocol to explore the biomarker and survival predictor of breast cancer based on the comprehensive analysis of pooled clinical datasets derived from a variety of publicly accessible databases, using the strategy of expression, correlation and survival analysis step by step.

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Keywords: Data Mining Integrative Analysis Biomarker Breast Cancer Public Databases ONCOMINE BC Gene-Expression Miner GOBO Gene Expression Survival Predictor Molecular Subtypes Data Visualization Data Interpretation
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