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Journal
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Biology
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Simulating and Analyzing Lipid Bilayers Using Molecular Dynamics
/
Building the System Coordinates for Molecular Dynamics Simulations (Video) | JoVE
JoVE Journal
Biology
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JoVE Journal
Biology
Building the System Coordinates for Molecular Dynamics Simulations
Building the System Coordinates for Molecular Dynamics Simulations (Video) | JoVE
Simulating and Analyzing Lipid Bilayers Using Molecular Dynamics
DOI:
10.3791/200474-v
•
02:42 min
•
September 01, 2023
•
Oluwatoyin Campbell
,
Van Le
,
Angela Aguirre
,
Viviana Monje-Galvan
1
Department of Chemical and Biological Engineering
,
State University of New York at Buffalo
,
2
Department of Mathematics
,
State University of New York at Buffalo
Tags
Keywords: Molecular Dynamics Simulations
Charmm-gui
Membrane Builder
Bilayer Builder
Heterogeneous Lipid
Rectangular Box
Hydration
Lipid Composition
DOPC
DPPE
Cholesterol
POPI
DOPS
Symmetric Membrane
Temperature
Pressure
Simulation Files
GROMACS
Visual Molecular Dynamics
PyMOL
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