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Neurovascular Network Explorer 2.0: A Simple Tool for Exploring and Sharing a Database of Optogenetically-evoked Vasomotion in Mouse Cortex In Vivo
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1Department of Radiology,University of California, San Diego, 2Central European Institute of Technology,Brno University of Technology, 3Department of Neurosciences,University of California, San Diego, 4Department of Physics,John Carroll University, 5Department of Biomedical Engineering,Boston University, 6Bioengineering Undergraduate Program,University of California, San Diego, 7Institute of Physical Engineering, Faculty of Mechanical Engineering,Brno University of Technology, 8Martinos Center for Biomedical Imaging,Massachusetts General Hospital, Harvard Medical School
Chapters
- 00:04Title
- 00:56Selection of Data for Analysis
- 02:07Exploration of the Selected Subset of Data and Further Data Refinement
- 03:28Exploration of the Final Subset of Data and Data Export
- 05:20Localization of Functional Measurement in a Reference Image and a 3D Image Stack
- 06:30Results: Exploring and Sharing a Database of Optogenetically-evoked Vasomotion in Mouse Cortex In Vivo
- 07:32Conclusion
A graphical user interface for exploring and sharing a database of optogenetically-induced vascular responses in mouse somatosensory cortex in vivo measured by 2-photon microscopy is presented. It allows browsing the data, criteria-based selection, averaging, localization of measurements within a 3D volume of vasculature and exporting the data.
Tags
Keywords:
Neurovascular Network Explorer 2.0NNE 2.0MATLABGraphical User InterfaceOptogenetically-evoked Vascular Diameter ChangesTwo Photon Microscopy3D Structure Of Vascular NetworkDatabaseCortical DepthBranching OrderBaseline DiameterVessel MorphologyTime CoursesGroup AverageOnset TimesTime-to-peakPeak AmplitudesSubject IDTree ID
