Harm van Bakel Department of Genetics and Genomic Sciences Icahn School of Medicine at Mount Sinai Biography Publications Institution JoVE Articles Harm van Bakel has not added a biography. If you are Harm van Bakel and would like to personalize this page please email our Author Liaison for assistance. Publications Influenza A Variants with Reduced Susceptibility to Baloxavir Isolated from Japanese Patients Are Fit and Transmit Through Respiratory Droplets Nature Microbiology. Nov, 2019 | Pubmed ID: 31768027 Blurred Molecular Epidemiological Lines Between the Two Dominant Methicillin-Resistant Clones Open Forum Infectious Diseases. Sep, 2019 | Pubmed ID: 31660395 A Complete Genome Screening Program of Clinical Methicillin-Resistant Staphylococcus Aureus Isolates Identifies the Origin and Progression of a Neonatal Intensive Care Unit Outbreak Journal of Clinical Microbiology. Dec, 2019 | Pubmed ID: 31578260 Influenza Virus Polymerase Mutation Stabilizes a Foreign Gene Inserted into the Virus Genome by Enhancing the Transcription/Replication Efficiency of the Modified Segment MBio. Oct, 2019 | Pubmed ID: 31575766 Circulation of Low Pathogenic Avian Influenza (LPAI) Viruses in Wild Birds and Poultry in the Netherlands, 2006-2016 Scientific Reports. Sep, 2019 | Pubmed ID: 31548582 Isolation of Highly Pathogenic H5N1 Influenza Viruses in 2009-2013 in Vietnam Frontiers in Microbiology. 2019 | Pubmed ID: 31293548 The Purine Biosynthesis Regulator PurR Moonlights As a Virulence Regulator in Proceedings of the National Academy of Sciences of the United States of America. Jul, 2019 | Pubmed ID: 31217288 Mandibular Dysmorphology Due to Abnormal Embryonic Osteogenesis in FGFR2-related Craniosynostosis Mice Disease Models & Mechanisms. 05, 2019 | Pubmed ID: 31064775 A Humanized MDCK Cell Line for the Efficient Isolation and Propagation of Human Influenza Viruses Nature Microbiology. 08, 2019 | Pubmed ID: 31036910 Mce3R Stress-Resistance Pathway Is Vulnerable to Small-Molecule Targeting That Improves Tuberculosis Drug Activities ACS Infectious Diseases. Jul, 2019 | Pubmed ID: 31012313 Sequential Evolution of Virulence and Resistance During Clonal Spread of Community-acquired Methicillin-resistant Proceedings of the National Academy of Sciences of the United States of America. 01, 2019 | Pubmed ID: 30635416 A Physical and Genetic Map of Identifies Extensive Rearrangements at the Loci Genome Research. 01, 2019 | Pubmed ID: 30409771 Transcriptome-wide Isoform-level Dysregulation in ASD, Schizophrenia, and Bipolar Disorder Science (New York, N.Y.). 12, 2018 | Pubmed ID: 30545856 Evidence of a Fixed Internal Gene Constellation in Influenza A Viruses Isolated from Wild Birds in Argentina (2006-2016) Emerging Microbes & Infections. Nov, 2018 | Pubmed ID: 30482896 Midface and Upper Airway Dysgenesis in FGFR2-related Craniosynostosis Involves Multiple Tissue-specific and Cell Cycle Effects Development (Cambridge, England). 10, 2018 | Pubmed ID: 30228104 Influenza Virus Infection Causes Global RNAPII Termination Defects Nature Structural & Molecular Biology. Sep, 2018 | Pubmed ID: 30177761 Genome Plasticity of -Defective Staphylococcus Aureus During Clinical Infection Infection and Immunity. 10, 2018 | Pubmed ID: 30061376 Reemergence of H3N8 Equine Influenza A Virus in Chile, 2018 Transboundary and Emerging Diseases. Dec, 2018 | Pubmed ID: 30054993 Corrigendum to "Community-Acquired Cavitary Pneumonia Linked to Use of a Home Humidifier" Case Reports in Infectious Diseases. 2018 | Pubmed ID: 29971174 Multiple Incursions and Recurrent Epidemic Fade-Out of H3N2 Canine Influenza A Virus in the United States Journal of Virology. 08, 2018 | Pubmed ID: 29875234 Avian Influenza Viruses in Wild Birds: Virus Evolution in a Multihost Ecosystem Journal of Virology. 08, 2018 | Pubmed ID: 29769347 Genetic Basis of Emerging Vancomycin, Linezolid, and Daptomycin Heteroresistance in a Case of Persistent Enterococcus Faecium Bacteremia Antimicrobial Agents and Chemotherapy. 04, 2018 | Pubmed ID: 29339387 Community-Acquired Cavitary Pneumonia Linked to Use of a Home Humidifier Case Reports in Infectious Diseases. 2017 | Pubmed ID: 29527364 Application of Genome Wide Association and Genomic Prediction for Improvement of Cacao Productivity and Resistance to Black and Frosty Pod Diseases Frontiers in Plant Science. 2017 | Pubmed ID: 29184558 Multi-platform 'Omics Analysis of Human Ebola Virus Disease Pathogenesis Cell Host & Microbe. Dec, 2017 | Pubmed ID: 29154144 Estimating Local Costs Associated With Clostridium Difficile Infection Using Machine Learning and Electronic Medical Records Infection Control and Hospital Epidemiology. 12, 2017 | Pubmed ID: 29103378 The RNA Exosome Syncs IAV-RNAPII Transcription to Promote Viral Ribogenesis and Infectivity Cell. May, 2017 | Pubmed ID: 28475896 Evidence of Intercontinental Spread and Uncommon Variants of Low-Pathogenicity Avian Influenza Viruses in Ducks Overwintering in Guatemala MSphere. Mar-Apr, 2017 | Pubmed ID: 28405632 Genomic Confirmation of Vancomycin-resistant Enterococcus Transmission from Deceased Donor to Liver Transplant Recipient PloS One. 2017 | Pubmed ID: 28301471 Avian Influenza Virus H5 Strain with North American and Eurasian Lineage Genes in an Antarctic Penguin Emerging Infectious Diseases. 12, 2016 | Pubmed ID: 27662612 Origins of the 2009 H1N1 Influenza Pandemic in Swine in Mexico ELife. 06, 2016 | Pubmed ID: 27350259 The FaceBase Consortium: a Comprehensive Resource for Craniofacial Researchers Development (Cambridge, England). 07, 2016 | Pubmed ID: 27287806 Topoisomerase 1 Inhibition Suppresses Inflammatory Genes and Protects from Death by Inflammation Science (New York, N.Y.). May, 2016 | Pubmed ID: 27127234 Targeting Viral Proteostasis Limits Influenza Virus, HIV, and Dengue Virus Infection Immunity. Jan, 2016 | Pubmed ID: 26789921 The PsychENCODE Project Nature Neuroscience. Dec, 2015 | Pubmed ID: 26605881 Whole-genome Sequencing Identifies Emergence of a Quinolone Resistance Mutation in a Case of Stenotrophomonas Maltophilia Bacteremia Antimicrobial Agents and Chemotherapy. Nov, 2015 | Pubmed ID: 26324280 Senataxin Suppresses the Antiviral Transcriptional Response and Controls Viral Biogenesis Nature Immunology. May, 2015 | Pubmed ID: 25822250 High Capsid-genome Correlation Facilitates Creation of AAV Libraries for Directed Evolution Molecular Therapy : the Journal of the American Society of Gene Therapy. Apr, 2015 | Pubmed ID: 25586687 BCL11B Expression in Intramembranous Osteogenesis During Murine Craniofacial Suture Development Gene Expression Patterns : GEP. Jan, 2015 | Pubmed ID: 25511173 Prothymosin α Variants Isolated from CD8+ T Cells and Cervicovaginal Fluid Suppress HIV-1 Replication Through Type I Interferon Induction The Journal of Infectious Diseases. May, 2015 | Pubmed ID: 25404520 Determination and Inference of Eukaryotic Transcription Factor Sequence Specificity Cell. Sep, 2014 | Pubmed ID: 25215497 Interplay of Host Microbiota, Genetic Perturbations, and Inflammation Promotes Local Development of Intestinal Neoplasms in Mice The Journal of Experimental Medicine. Mar, 2014 | Pubmed ID: 24590763 A Compendium of Nucleosome and Transcript Profiles Reveals Determinants of Chromatin Architecture and Transcription PLoS Genetics. May, 2013 | Pubmed ID: 23658529 Laser Capture Microdissection of Mouse Embryonic Cartilage and Bone for Gene Expression Analysis Meng Wu1, Divya Kriti1, Harm van Bakel1,2, Ethylin Wang Jabs1, Greg Holmes1 1Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, 2Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai JoVE 60503 Biologie du développement
Laser Capture Microdissection of Mouse Embryonic Cartilage and Bone for Gene Expression Analysis Meng Wu1, Divya Kriti1, Harm van Bakel1,2, Ethylin Wang Jabs1, Greg Holmes1 1Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, 2Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai JoVE 60503 Biologie du développement