Mitchel J. Doktycz Biosciences Division Oak Ridge National Laboratory Biography Publications Institution JoVE Articles Mitchel J. Doktycz has not added a biography. If you are Mitchel J. Doktycz and would like to personalize this page please email our Author Liaison for assistance. Publications Advances and Perspectives in Discovery and Functional Analysis of Small Secreted Proteins in Plants Horticulture Research. Jun, 2021 | Pubmed ID: 34059650 Formation, Characterization and Modeling of Emergent Synthetic Microbial Communities Computational and Structural Biotechnology Journal. 2021 | Pubmed ID: 33995895 A Lysate Proteome Engineering Strategy for Enhancing Cell-free Metabolite Production Metabolic Engineering Communications. Jun, 2021 | Pubmed ID: 33552897 Machine Learning-based Prediction of Enzyme Substrate Scope: Application to Bacterial Nitrilases Proteins. 03, 2021 | Pubmed ID: 33118210 Targeted Growth Medium Dropouts Promote Aromatic Compound Synthesis in Crude Cell-Free Systems ACS Synthetic Biology. 11, 2020 | Pubmed ID: 33044063 A Carotenoid-deficient Mutant of the Plant-associated Microbe Pantoea Sp. YR343 Displays an Altered Membrane Proteome Scientific Reports. 09, 2020 | Pubmed ID: 32917935 Computationally Guided Discovery and Experimental Validation of Indole-3-acetic Acid Synthesis Pathways ACS Chemical Biology. 12, 2019 | Pubmed ID: 31693336 Microfluidics and Metabolomics Reveal Symbiotic Bacterial-Fungal Interactions Between and Include Metabolite Exchange Frontiers in Microbiology. 2019 | Pubmed ID: 31632357 Label-free Time- and Space-resolved Exometabolite Sampling of Growing Plant Roots Through Nanoporous Interfaces Scientific Reports. 07, 2019 | Pubmed ID: 31312009 Pore-scale Hydrodynamics Influence the Spatial Evolution of Bacterial Biofilms in a Microfluidic Porous Network PloS One. 2019 | Pubmed ID: 31246972 Increasing Access to Microfluidics for Studying Fungi and Other Branched Biological Structures Fungal Biology and Biotechnology. 2019 | Pubmed ID: 31198578 Loss of Carotenoids from Membranes of Pantoea Sp. YR343 Results in Altered Lipid Composition and Changes in Membrane Biophysical Properties Biochimica Et Biophysica Acta. Biomembranes. 07, 2019 | Pubmed ID: 31095944 Itaconic Acid Degradation in : the Role of Unexpected Bioconversion Pathways Fungal Biology and Biotechnology. 2019 | Pubmed ID: 30622724 Elucidating the Potential of Crude Cell Extracts for Producing Pyruvate from Glucose Synthetic Biology (Oxford, England). 2018 | Pubmed ID: 32995514 Exploration of the Biosynthetic Potential of the Microbiome MSystems. Sep-Oct, 2018 | Pubmed ID: 30320216 Elucidating Duramycin's Bacterial Selectivity and Mode of Action on the Bacterial Cell Envelope Frontiers in Microbiology. 2018 | Pubmed ID: 29491859 Nano-Enabled Approaches to Chemical Imaging in Biosystems Annual Review of Analytical Chemistry (Palo Alto, Calif.). 06, 2018 | Pubmed ID: 29490189 Abiotic Stresses Shift Belowground -Associated Bacteria Toward a Core Stress Microbiome MSystems. Jan-Feb, 2018 | Pubmed ID: 29404422 Automated Interpretation and Extraction of Topographic Information from Time of Flight Secondary Ion Mass Spectrometry Data Scientific Reports. 12, 2017 | Pubmed ID: 29213083 β-(1,3)-Glucan Unmasking in Some Candida Albicans Mutants Correlates with Increases in Cell Wall Surface Roughness and Decreases in Cell Wall Elasticity Infection and Immunity. Jan, 2017 | Pubmed ID: 27849179 Enrichment of Root Endophytic Bacteria from Populus Deltoides and Single-Cell-Genomics Analysis Applied and Environmental Microbiology. Sep, 2016 | Pubmed ID: 27422831 While-you-wait Proteins? Producing Biomolecules at the Point of Need Expert Review of Proteomics. Aug, 2016 | Pubmed ID: 27402489 Two Poplar-Associated Bacterial Isolates Induce Additive Favorable Responses in a Constructed Plant-Microbiome System Frontiers in Plant Science. 2016 | Pubmed ID: 27200001 Stochastic Assembly of Bacteria in Microwell Arrays Reveals the Importance of Confinement in Community Development PloS One. 2016 | Pubmed ID: 27152511 A Carotenoid-Deficient Mutant in Pantoea Sp. YR343, a Bacteria Isolated from the Rhizosphere of Populus Deltoides, Is Defective in Root Colonization Frontiers in Microbiology. 2016 | Pubmed ID: 27148182 Toward Microfluidic Reactors for Cell-Free Protein Synthesis at the Point-of-Care Small (Weinheim an Der Bergstrasse, Germany). Feb, 2016 | Pubmed ID: 26690885 Microstencils to Generate Defined, Multi-species Patterns of Bacteria Biomicrofluidics. Nov, 2015 | Pubmed ID: 26594264 Fabrication of Nanoporous Membranes for Tuning Microbial Interactions and Biochemical Reactions Journal of Vacuum Science and Technology. B, Nanotechnology & Microelectronics : Materials, Processing, Measurement, & Phenomena : JVST B. Nov, 2015 | Pubmed ID: 26543684 Metabolic Functions of Pseudomonas Fluorescens Strains from Populus Deltoides Depend on Rhizosphere or Endosphere Isolation Compartment Frontiers in Microbiology. 2015 | Pubmed ID: 26528266 New Surface Radiolabeling Schemes of Super Paramagnetic Iron Oxide Nanoparticles (SPIONs) for Biodistribution Studies Nanoscale. Apr, 2015 | Pubmed ID: 25790032 Microstructured Block Copolymer Surfaces for Control of Microbe Adhesion and Aggregation Biosensors. Mar, 2014 | Pubmed ID: 25587410 Evaluation and Validation of De Novo and Hybrid Assembly Techniques to Derive High-quality Genome Sequences Bioinformatics (Oxford, England). Oct, 2014 | Pubmed ID: 24930142 Multi-input Regulation and Logic with T7 Promoters in Cells and Cell-free Systems PloS One. 2013 | Pubmed ID: 24194933 Enteroaggregative Escherichia Coli: Surface Protein Dispersin Increases Bacterial Uptake of Ciprofloxacin International Journal of Antimicrobial Agents. Nov, 2013 | Pubmed ID: 24011504 Layer-by-layer Templated Assembly of Silica at the Nanoscale Langmuir : the ACS Journal of Surfaces and Colloids. Feb, 2013 | Pubmed ID: 23360298 Relating Nanomaterial Properties and Microbial Toxicity Nanoscale. Jan, 2013 | Pubmed ID: 23203029 Monodisperse Alginate Microgel Formation in a Three-dimensional Microfluidic Droplet Generator Biomicrofluidics. 2012 | Pubmed ID: 24198865 Twenty-one Genome Sequences from Pseudomonas Species and 19 Genome Sequences from Diverse Bacteria Isolated from the Rhizosphere and Endosphere of Populus Deltoides Journal of Bacteriology. Nov, 2012 | Pubmed ID: 23045501 Draft Genome Sequence of Rhizobium Sp. Strain PDO1-076, a Bacterium Isolated from Populus Deltoides Journal of Bacteriology. May, 2012 | Pubmed ID: 22493196 Pseudomonas Fluorescens Induces Strain-dependent and Strain-independent Host Plant Responses in Defense Networks, Primary Metabolism, Photosynthesis, and Fitness Molecular Plant-microbe Interactions : MPMI. Jun, 2012 | Pubmed ID: 22375709 Zytotoxizität Induziert Durch Manipulierte Silber Nanocrystallites Ist Abhängig Von Oberflächenbeschichtungen Und Zelltypen Langmuir : the ACS Journal of Surfaces and Colloids. Feb, 2012 | Pubmed ID: 22216981 Enzymreaktionen Im Nanoporöse, Picoliter Volumen Behälter Analytical Chemistry. Jan, 2012 | Pubmed ID: 22148720 Expression-Optimierung Und Synthetische Gen Netzwerke in Zellfreien Systemen Nucleic Acids Research. Dec, 2011 | Pubmed ID: 22180537 Die Chemotaxis-artigen Che1 Pathway Hat Eine Indirekte Rolle in Klebstoff Zelleneigenschaften Der Azospirillum Brasilense FEMS Microbiology Letters. Oct, 2011 | Pubmed ID: 22092709 Monodispersed Biokompatible Silbersulfid Nanopartikel: Oberflächlich Extrazelluläre Biosynthese Mit Dem γ-Proteobacterium, Shewanella Oneidensis Acta Biomaterialia. Dec, 2011 | Pubmed ID: 21798382 Verschiedene Mikrobielle Gemeinschaften Innerhalb Der Endosphere Und Der Rhizosphäre Populus Deltoides Wurzeln in Kontrastierenden Bodentypen Applied and Environmental Microbiology. Sep, 2011 | Pubmed ID: 21764952 Modell Für Biologische Kommunikation in Einer Nanofabricated Zelle-Nachäffer Angetrieben Durch Stochastische Resonanz Nano Communication Networks. Mar, 2011 | Pubmed ID: 21731597 Auswirkungen Von Misshandelt Inhibitorischen Konzentration Von Ciprofloxacin Auf Enteroaggregative Escherichia Coli Und Die Rolle Der Oberfläche Protein Dispersin International Journal of Antimicrobial Agents. Jul, 2011 | Pubmed ID: 21570813 Biofabrication Der Diskrete Kugelförmige Gold-Nanopartikel Mit Metall Reduzierendes Bakterium Shewanella Oneidensis Acta Biomaterialia. May, 2011 | Pubmed ID: 21241833 Charakterisierung Der Zelle Oberfläche Und Extrazelluläre Matrix Umgestaltung Der Azospirillum Brasilense Chemotaxis-ähnliche 1 Signaltransduktion Stoffwechselweg Mutanten Von Rasterkraftmikroskopie FEMS Microbiology Letters. Jan, 2011 | Pubmed ID: 21105907 Nanostructured Silicon Membranes for Control of Molecular Transport Journal of Vacuum Science and Technology. B, Nanotechnology & Microelectronics : Materials, Processing, Measurement, & Phenomena : JVST B. Nov, 2010 | Pubmed ID: 24932436 Auswirkungen Veränderter CER-Oxid-Nanopartikel Auf Bakterielles Wachstum Und Rentabilität Applied and Environmental Microbiology. Dec, 2010 | Pubmed ID: 20952651 Rasterkraftmikroskopie Von Biologischen Proben Wiley Interdisciplinary Reviews. Nanomedicine and Nanobiotechnology. Nov-Dec, 2010 | Pubmed ID: 20672388 Oberfläche Kostenlos - Und Raum-abhängigen Transport Von Proteinen in überfüllten Umgebungen Des Nanotailored Beiträge ACS Nano. Jun, 2010 | Pubmed ID: 20515056 Silberne Nanocrystallites: Biofabrication Mit Shewanella Oneidensis, Und Die Bewertung Von Deren Vergleichender Toxizität Auf Gramnegative Und Grampositive Bakterien Environmental Science & Technology. Jul, 2010 | Pubmed ID: 20509652 Entwicklung Und Herstellung Von Nanoporöse Silizium-basierten Bioreaktoren Innerhalb Einer Mikrofluidische-Chip Lab on a Chip. May, 2010 | Pubmed ID: 20390137 Zelle Freie Übersetzung in Veränderter Picoliter-Volume-Containern Annual ORNL Biomedical Science and Engineering Center Conference ORNL Biomedical Science and Engineering Center Conference. Jun, 2009 | Pubmed ID: 21278819 Einer In-vivo Bildgebung-gegründeten Probe Zum Nachweis Von Protein-Interaktionen über Einer Breiten Strecke Der Verbindlichen Affinitäten Analytical Biochemistry. Dec, 2009 | Pubmed ID: 19698693 Auswirkungenauf Die Electropolymerization Von Polypyrrol Ultramikroelektrode Dimensionen Journal of Applied Physics. Jun, 2009 | Pubmed ID: 19657404 Positions Kontrolle Der Katalysator-Nanopartikel Für Die Synthese Von Hoher Dichte Kohlenstoff Nanofasern Arrays Carbon. 2008 | Pubmed ID: 19448842 Actuatable Membranen, Die Auf Der Grundlage Von Polypyrrol-beschichtete Vertikal Ausgerichteten Kohlenstoff Nanofasern ACS Nano. Feb, 2008 | Pubmed ID: 19206624 Eine Allgemeine Regelung Für Die Untersuchung Von Protein-Protein Interaktionen in Gram-negativen Bakterien Journal of Proteome Research. Aug, 2008 | Pubmed ID: 18590317 Steuern Die Abmessungen Der Kohlenstoff Nanofasern Strukturen Durch Die Electropolymerization Von Pyrrol Synthetic Metals. Apr, 2007 | Pubmed ID: 18431459 Nano-fähigen Synthetische Biologie Molecular Systems Biology. 2007 | Pubmed ID: 17625513 Die in Der Nähe Von Nackten Haarlosen (Hr(N)) Mutation Stört Haar Bildung Aber Ist Nicht Durch Eine Mutation in Die Hairless Kodierung Der Region The Journal of Investigative Dermatology. Jul, 2007 | Pubmed ID: 17330134 Bewertung Eines Oberfläche-Probenahmesonde Electrospray Massenspektrometrie Systems Zur Analyse Proteine Oberfläche Abgelagert Und Affinität Erfasst Rapid Communications in Mass Spectrometry : RCM. 2006 | Pubmed ID: 16521171 Optimiert Beadmilling Von Geweben Für Das Hochdurchsatz-RNA-Produktions-und Microarray-basierte Analysen Analytical Biochemistry. Sep, 2004 | Pubmed ID: 15301954 AFM Imaging of Bacteria in Liquid Media Immobilized on Gelatin Coated Mica Surfaces Ultramicroscopy. Oct-Nov, 2003 | Pubmed ID: 12801673 Fingerprinting Von Prokaryotischen 16S RRNA-Gene Mittels Microarrays Und Oligodesoxyribonukleotid Virtuellen Hybridisierung Nucleic Acids Research. Jan, 2003 | Pubmed ID: 12527788 Genomes to Life "Center for Molecular and Cellular Systems": Ein Forschungsprogramm Für Die Identifizierung Und Charakterisierung Von Protein-Komplexen Omics : a Journal of Integrative Biology. 2002 | Pubmed ID: 12630408 Comparative Analyses of the Secondary Structures of Synthetic and Intracellular Yeast MFA2 MRNAs Proceedings of the National Academy of Sciences of the United States of America. Dec, 1998 | Pubmed ID: 9843938 Flüssigkeitschromatographie gekoppelt an Brechungsindex oder massenspektrometrische Detektion zur Metabolitenprofilierung in lysatbasierten zellfreien Systemen Jaime Lorenzo N. Dinglasan1,3, David T. Reeves2,3, Robert L. Hettich3, Mitchel J. Doktycz3 1Graduate School of Genome Science & Technology, University of Tennessee Knoxville, 2Bredesen Center for Interdisciplinary Research, University of Tennessee Knoxville, 3Biosciences Division, Oak Ridge National Laboratory JoVE 62852 Bio-ingénierie Bildgebung der Wurzelhaare Morphologie der Arabidopsis Sämlinge in einer zweischichtigen mikrofluidischen Plattform Jayde A. Aufrecht1,2, Jennifer M. Ryan3, Sahar Hasim4, David P. Allison2,3, Andreas Nebenführ3, Mitchel J. Doktycz1,2, Scott T. Retterer1,2 1Bredesen Center for Interdisciplinary Research and Graduate Education, University of Tennessee, 2Bioscience Division and Center for Nanophase Materials Sciences, Oak Ridge national Laboratory, 3Department of Biochemistry and Cellular and Molecular Biology, University of Tennessee, 4Department of Microbiology, University of Tennessee JoVE 55971 Bio-ingénierie
Flüssigkeitschromatographie gekoppelt an Brechungsindex oder massenspektrometrische Detektion zur Metabolitenprofilierung in lysatbasierten zellfreien Systemen Jaime Lorenzo N. Dinglasan1,3, David T. Reeves2,3, Robert L. Hettich3, Mitchel J. Doktycz3 1Graduate School of Genome Science & Technology, University of Tennessee Knoxville, 2Bredesen Center for Interdisciplinary Research, University of Tennessee Knoxville, 3Biosciences Division, Oak Ridge National Laboratory JoVE 62852 Bio-ingénierie
Bildgebung der Wurzelhaare Morphologie der Arabidopsis Sämlinge in einer zweischichtigen mikrofluidischen Plattform Jayde A. Aufrecht1,2, Jennifer M. Ryan3, Sahar Hasim4, David P. Allison2,3, Andreas Nebenführ3, Mitchel J. Doktycz1,2, Scott T. Retterer1,2 1Bredesen Center for Interdisciplinary Research and Graduate Education, University of Tennessee, 2Bioscience Division and Center for Nanophase Materials Sciences, Oak Ridge national Laboratory, 3Department of Biochemistry and Cellular and Molecular Biology, University of Tennessee, 4Department of Microbiology, University of Tennessee JoVE 55971 Bio-ingénierie