Nuria Lopez-Bigas Research Unit on Biomedical Informatics Universitat Pompeu Fabra Biography Publications Institution JoVE Articles Nuria Lopez-Bigas has not added a biography. If you are Nuria Lopez-Bigas and would like to personalize this page please email our Author Liaison for assistance. Publications SVGMap: Configurable Image Browser for Experimental Data Bioinformatics (Oxford, England). Jan, 2012 | Pubmed ID: 22034520 BioMart Central Portal: an Open Database Network for the Biological Community Database : the Journal of Biological Databases and Curation. 2011 | Pubmed ID: 21930507 Integrative Cancer Genomics (IntOGen) in Biomart Database : the Journal of Biological Databases and Curation. 2011 | Pubmed ID: 21903633 Co-regulation of Histone-modifying Enzymes in Cancer PloS One. 2011 | Pubmed ID: 21886846 Mir-11 Limits the Proapoptotic Function of Its Host Gene, DE2f1 Genes & Development. Sep, 2011 | Pubmed ID: 21856777 Gitools: Analysis and Visualisation of Genomic Data Using Interactive Heat-maps PloS One. 2011 | Pubmed ID: 21602921 Improving the Assessment of the Outcome of Nonsynonymous SNVs with a Consensus Deleteriousness Score, Condel American Journal of Human Genetics. Apr, 2011 | Pubmed ID: 21457909 Cooperation Between DE2F1 and Yki/Sd Defines a Distinct Transcriptional Program Necessary to Bypass Cell Cycle Exit Genes & Development. Feb, 2011 | Pubmed ID: 21325133 Selective Targeting of Histone Methylation Cell Cycle (Georgetown, Tex.). Feb, 2011 | Pubmed ID: 21270517 Transcriptional Activation of Polycomb-repressed Genes by ZRF1 Nature. Dec, 2010 | Pubmed ID: 21179169 International Network of Cancer Genome Projects Nature. Apr, 2010 | Pubmed ID: 20393554 Whole Genome Analysis of P38 SAPK-mediated Gene Expression Upon Stress BMC Genomics. 2010 | Pubmed ID: 20187982 IntOGen: Integration and Data Mining of Multidimensional Oncogenomic Data Nature Methods. Feb, 2010 | Pubmed ID: 20111033 An Oligo-based Microarray Offers Novel Transcriptomic Approaches for the Analysis of Pathogen Resistance and Fruit Quality Traits in Melon (Cucumis Melo L.) BMC Genomics. 2009 | Pubmed ID: 19821986 Jagged1 is the Pathological Link Between Wnt and Notch Pathways in Colorectal Cancer Proceedings of the National Academy of Sciences of the United States of America. Apr, 2009 | Pubmed ID: 19325125 Biological Convergence of Cancer Signatures PloS One. 2009 | Pubmed ID: 19229342 Patterns of Evolutionary Constraints on Genes in Humans BMC Evolutionary Biology. 2008 | Pubmed ID: 18840274 Genome-wide Analysis of the H3K4 Histone Demethylase RBP2 Reveals a Transcriptional Program Controlling Differentiation Molecular Cell. Aug, 2008 | Pubmed ID: 18722178 Prioritization of Candidate Cancer Genes--an Aid to Oncogenomic Studies Nucleic Acids Research. Oct, 2008 | Pubmed ID: 18710882 SNP and Haplotype Mapping for Genetic Analysis in the Rat Nature Genetics. May, 2008 | Pubmed ID: 18443594 Distinct Patterns in the Regulation and Evolution of Human Cancer Genes In Silico Biology. 2008 | Pubmed ID: 18430988 Functional Protein Divergence in the Evolution of Homo Sapiens Genome Biology. 2008 | Pubmed ID: 18279504 On the Association Between Chromosomal Rearrangements and Genic Evolution in Humans and Chimpanzees Genome Biology. 2007 | Pubmed ID: 17971225 Identification and Analysis of Functional Elements in 1% of the Human Genome by the ENCODE Pilot Project Nature. Jun, 2007 | Pubmed ID: 17571346 A Partially Supervised Classification Approach to Dominant and Recessive Human Disease Gene Prediction Computer Methods and Programs in Biomedicine. Mar, 2007 | Pubmed ID: 17258838 Differences in the Evolutionary History of Disease Genes Affected by Dominant or Recessive Mutations BMC Genomics. 2006 | Pubmed ID: 16817963 Computational Disease Gene Identification: a Concert of Methods Prioritizes Type 2 Diabetes and Obesity Candidate Genes Nucleic Acids Research. 2006 | Pubmed ID: 16757574 Structural and Functional Properties of Genes Involved in Human Cancer BMC Genomics. 2006 | Pubmed ID: 16405732 Highly Consistent Patterns for Inherited Human Diseases at the Molecular Level Bioinformatics (Oxford, England). Feb, 2006 | Pubmed ID: 16287936 Expansion of the BioCyc Collection of Pathway/genome Databases to 160 Genomes Nucleic Acids Research. 2005 | Pubmed ID: 16246909 CoGenT++: an Extensive and Extensible Data Environment for Computational Genomics Bioinformatics (Oxford, England). Oct, 2005 | Pubmed ID: 16216832 Are Splicing Mutations the Most Frequent Cause of Hereditary Disease? FEBS Letters. Mar, 2005 | Pubmed ID: 15792793 Genome-wide Identification of Genes Likely to Be Involved in Human Genetic Disease Nucleic Acids Research. 2004 | Pubmed ID: 15181176 Beyond 100 Genomes Genome Biology. 2003 | Pubmed ID: 12734008 Expression Profiles of the Connexin Genes, Gjb1 and Gjb3, in the Developing Mouse Cochlea Mechanisms of Development. Dec, 2002 | Pubmed ID: 14516671 Expression Profiles of the Connexin Genes, Gjb1 and Gjb3, in the Developing Mouse Cochlea Gene Expression Patterns : GEP. Nov, 2002 | Pubmed ID: 12617848 Connexin Mutations in Hearing Loss, Dermatological and Neurological Disorders Trends in Molecular Medicine. May, 2002 | Pubmed ID: 12067629 A Common Frameshift Mutation and Other Variants in GJB4 (connexin 30.3): Analysis of Hearing Impairment Families Human Mutation. Apr, 2002 | Pubmed ID: 11933201 Genome-wide Analysis using ChIP to Identify Isoform-specific Gene Targets Michael L. Beshiri1, Abul Islam2, Dannielle C. DeWaal1, William F. Richter1, Jennifer Love3, Nuria Lopez-Bigas2, Elizaveta V. Benevolenskaya1 1Department of Biochemistry and Molecular Genetics, University of Illinois Chicago - UIC, 2Research Unit on Biomedical Informatics, Universitat Pompeu Fabra, 3Genome Technology Core, Whitehead Institute for Biomedical Research JoVE 2101 Biologie
Genome-wide Analysis using ChIP to Identify Isoform-specific Gene Targets Michael L. Beshiri1, Abul Islam2, Dannielle C. DeWaal1, William F. Richter1, Jennifer Love3, Nuria Lopez-Bigas2, Elizaveta V. Benevolenskaya1 1Department of Biochemistry and Molecular Genetics, University of Illinois Chicago - UIC, 2Research Unit on Biomedical Informatics, Universitat Pompeu Fabra, 3Genome Technology Core, Whitehead Institute for Biomedical Research JoVE 2101 Biologie