Janet K. Jansson Biological Sciences Division Pacific Northwest National Laboratory Biography Publications Institution JoVE Articles Janet K. Jansson has not added a biography. If you are Janet K. Jansson and would like to personalize this page please email our Author Liaison for assistance. Publications Earth Microbiome Project and Global Systems Biology MSystems. May-Jun, 2018 | Pubmed ID: 29657969 Current Understanding of the Human Microbiome Nature Medicine. Apr, 2018 | Pubmed ID: 29634682 Landscape Topography Structures the Soil Microbiome in Arctic Polygonal Tundra Nature Communications. 02, 2018 | Pubmed ID: 29472560 The Soil Microbiome-from Metagenomics to Metaphenomics Current Opinion in Microbiology. Feb, 2018 | Pubmed ID: 29454931 Metagenomic Analysis of Subtidal Sediments from Polar and Subpolar Coastal Environments Highlights the Relevance of Anaerobic Hydrocarbon Degradation Processes Microbial Ecology. Jan, 2018 | Pubmed ID: 28702706 A Communal Catalogue Reveals Earth's Multiscale Microbial Diversity Nature. 11, 2017 | Pubmed ID: 29088705 Impact of Dietary Resistant Starch on the Human Gut Microbiome, Metaproteome, and Metabolome MBio. Oct, 2017 | Pubmed ID: 29042495 Prospecting Biotechnologically-Relevant Monooxygenases from Cold Sediment Metagenomes: An In Silico Approach Marine Drugs. Apr, 2017 | Pubmed ID: 28397770 Indirect Interspecies Regulation: Transcriptional and Physiological Responses of a Cyanobacterium to Heterotrophic Partnership MSystems. Mar-Apr, 2017 | Pubmed ID: 28289730 Dynamics of the Human Gut Microbiome in Inflammatory Bowel Disease Nature Microbiology. Feb, 2017 | Pubmed ID: 28191884 Microbial and Viral-like Rhodopsins Present in Coastal Marine Sediments from Four Polar and Subpolar Regions FEMS Microbiology Ecology. 01, 2017 | Pubmed ID: 27815287 Trade-offs Between Microbiome Diversity and Productivity in a Stratified Microbial Mat The ISME Journal. 02, 2017 | Pubmed ID: 27801910 Diets High in Resistant Starch Increase Plasma Levels of Trimethylamine-N-oxide, a Gut Microbiome Metabolite Associated with CVD Risk The British Journal of Nutrition. Dec, 2016 | Pubmed ID: 27993177 Influence of Early Life Exposure, Host Genetics and Diet on the Mouse Gut Microbiome and Metabolome Nature Microbiology. Nov, 2016 | Pubmed ID: 27892936 Moleculo Long-Read Sequencing Facilitates Assembly and Genomic Binning from Complex Soil Metagenomes MSystems. May-Jun, 2016 | Pubmed ID: 27822530 Improved Bacterial 16S RRNA Gene (V4 and V4-5) and Fungal Internal Transcribed Spacer Marker Gene Primers for Microbial Community Surveys MSystems. Jan-Feb, 2016 | Pubmed ID: 27822518 Temporal Dynamics of Hot Desert Microbial Communities Reveal Structural and Functional Responses to Water Input Scientific Reports. Sep, 2016 | Pubmed ID: 27680878 A Multi-omic Future for Microbiome Studies Nature Microbiology. Apr, 2016 | Pubmed ID: 27572648 Gut Microbial Alterations Associated With Protection From Autoimmune Uveitis Investigative Ophthalmology & Visual Science. 07, 2016 | Pubmed ID: 27415793 Microbiome-wide Association Studies Link Dynamic Microbial Consortia to Disease Nature. 07, 2016 | Pubmed ID: 27383984 Metagenomics Unveils the Attributes of the Alginolytic Guilds of Sediments from Four Distant Cold Coastal Environments Environmental Microbiology. Dec, 2016 | Pubmed ID: 27348213 Spotlight On… Janet K. Jansson FEMS Microbiology Letters. 08, 2016 | Pubmed ID: 27343130 Metabolic Model-Based Integration of Microbiome Taxonomic and Metabolomic Profiles Elucidates Mechanistic Links Between Ecological and Metabolic Variation MSystems. Jan-Feb, 2016 | Pubmed ID: 27239563 Back to the Future of Soil Metagenomics Frontiers in Microbiology. 2016 | Pubmed ID: 26903960 Tools for the Microbiome: Nano and Beyond ACS Nano. Jan, 2016 | Pubmed ID: 26695070 Diverse Bacterial Groups Contribute to the Alkane Degradation Potential of Chronically Polluted Subantarctic Coastal Sediments Microbial Ecology. Jan, 2016 | Pubmed ID: 26547568 Identification of Genetic Factors That Modify Motor Performance and Body Weight Using Collaborative Cross Mice Scientific Reports. Nov, 2015 | Pubmed ID: 26548763 Complete Genome Sequence of Bacillus Amyloliquefaciens Strain Co1-6, a Plant Growth-Promoting Rhizobacterium of Calendula Officinalis Genome Announcements. Aug, 2015 | Pubmed ID: 26272562 Insights into the Respiratory Tract Microbiota of Patients with Cystic Fibrosis During Early Pseudomonas Aeruginosa Colonization SpringerPlus. 2015 | Pubmed ID: 26266076 Draft Genome Sequence of Paenibacillus Polymyxa Strain Mc5Re-14, an Antagonistic Root Endophyte of Matricaria Chamomilla Genome Announcements. Aug, 2015 | Pubmed ID: 26251493 Draft Genome Sequence of Streptomyces Sp. Strain Wb2n-11, a Desert Isolate with Broad-Spectrum Antagonism Against Soilborne Phytopathogens Genome Announcements. Aug, 2015 | Pubmed ID: 26251492 Phyllostomid Bat Microbiome Composition is Associated to Host Phylogeny and Feeding Strategies Frontiers in Microbiology. 2015 | Pubmed ID: 26042099 Distinct Summer and Winter Bacterial Communities in the Active Layer of Svalbard Permafrost Revealed by DNA- and RNA-based Analyses Frontiers in Microbiology. 2015 | Pubmed ID: 25983731 FOAM (Functional Ontology Assignments for Metagenomes): a Hidden Markov Model (HMM) Database with Environmental Focus Nucleic Acids Research. Oct, 2014 | Pubmed ID: 25260589 The Earth Microbiome Project: Successes and Aspirations BMC Biology. Aug, 2014 | Pubmed ID: 25184604 The Microbial Nitrogen Cycling Potential is Impacted by Polyaromatic Hydrocarbon Pollution of Marine Sediments Frontiers in Microbiology. 2014 | Pubmed ID: 24723913 Amino Acid Treatment Enhances Protein Recovery from Sediment and Soils for Metaproteomic Studies Proteomics. Oct, 2013 | Pubmed ID: 23776032 The MPLEx Protocol for Multi-omic Analyses of Soil Samples Carrie D. Nicora*1, Kristin E. Burnum-Johnson*1, Ernesto S. Nakayasu1, Cameron P. Casey1, Richard A. White III1, Taniya Roy Chowdhury1, Jennifer E. Kyle1, Young-Mo Kim1, Richard D. Smith1, Thomas O. Metz1, Janet K. Jansson1, Erin S. Baker1 1Biological Sciences Division, Pacific Northwest National Laboratory JoVE 57343 Química
The MPLEx Protocol for Multi-omic Analyses of Soil Samples Carrie D. Nicora*1, Kristin E. Burnum-Johnson*1, Ernesto S. Nakayasu1, Cameron P. Casey1, Richard A. White III1, Taniya Roy Chowdhury1, Jennifer E. Kyle1, Young-Mo Kim1, Richard D. Smith1, Thomas O. Metz1, Janet K. Jansson1, Erin S. Baker1 1Biological Sciences Division, Pacific Northwest National Laboratory JoVE 57343 Química