Jian-Kang Zhu Department of Horticulture and Landscape Architecture Purdue University Biography Publications Institution JoVE Articles Jian-Kang Zhu has not added a biography. If you are Jian-Kang Zhu and would like to personalize this page please email our Author Liaison for assistance. Publications Emerging Roles of RNA Processing Factors in Regulating Long Non-coding RNAs RNA Biology. Jul, 2014 | Pubmed ID: 25144332 Identification of ERK1 Direct Substrates Using Stable Isotope Labeled Kinase Assay-Linked Phosphoproteomics Molecular & Cellular Proteomics : MCP. Jul, 2014 | Pubmed ID: 25022875 Regulation of Active DNA Demethylation by an α-Crystallin Domain Protein in Arabidopsis Molecular Cell. Aug, 2014 | Pubmed ID: 25002145 Protocol: a Beginner's Guide to the Analysis of RNA-directed DNA Methylation in Plants Plant Methods. 2014 | Pubmed ID: 24955108 Overproduction of Stomatal Lineage Cells in Arabidopsis Mutants Defective in Active DNA Demethylation Nature Communications. 2014 | Pubmed ID: 24898766 The ABA Receptor PYL8 Promotes Lateral Root Growth by Enhancing MYB77-dependent Transcription of Auxin-responsive Genes Science Signaling. Jun, 2014 | Pubmed ID: 24894996 Constitutive Production of Nitric Oxide Leads to Enhanced Drought Stress Resistance and Extensive Transcriptional Reprogramming in Arabidopsis Journal of Experimental Botany. Aug, 2014 | Pubmed ID: 24868034 Transcription of Nuclear Organellar DNA in a Model Plant System Genome Biology and Evolution. 2014 | Pubmed ID: 24868015 The CRISPR/Cas9 System Produces Specific and Homozygous Targeted Gene Editing in Rice in One Generation Plant Biotechnology Journal. Aug, 2014 | Pubmed ID: 24854982 RNA Splicing Factors and RNA-Directed DNA Methylation Biology. 2014 | Pubmed ID: 24833507 An Rrp6-like Protein Positively Regulates Noncoding RNA Levels and DNA Methylation in Arabidopsis Molecular Cell. May, 2014 | Pubmed ID: 24726328 The Arabidopsis STRESS RESPONSE SUPPRESSOR DEAD-box RNA Helicases Are Nucleolar- and Chromocenter-localized Proteins That Undergo Stress-mediated Relocalization and Are Involved in Epigenetic Gene Silencing The Plant Journal : for Cell and Molecular Biology. Jul, 2014 | Pubmed ID: 24724701 Multigeneration Analysis Reveals the Inheritance, Specificity, and Patterns of CRISPR/Cas-induced Gene Modifications in Arabidopsis Proceedings of the National Academy of Sciences of the United States of America. Mar, 2014 | Pubmed ID: 24550464 Sulfate Availability Affects ABA Levels and Germination Response to ABA and Salt Stress in Arabidopsis Thaliana The Plant Journal : for Cell and Molecular Biology. Feb, 2014 | Pubmed ID: 24330104 Arabidopsis EDM2 Promotes IBM1 Distal Polyadenylation and Regulates Genome DNA Methylation Patterns Proceedings of the National Academy of Sciences of the United States of America. Jan, 2014 | Pubmed ID: 24248388 Using Arabidopsis-related Model Species (ARMS): Growth, Genetic Transformation, and Comparative Genomics Methods in Molecular Biology (Clifton, N.J.). 2014 | Pubmed ID: 24057359 RNA-directed DNA Methylation in Plants: Where to Start? RNA Biology. Oct, 2013 | Pubmed ID: 25003825 The Unique Mode of Action of a Divergent Member of the ABA-receptor Protein Family in ABA and Stress Signaling Cell Research. Dec, 2013 | Pubmed ID: 24189045 Structural Basis for RNA Recognition by a Dimeric PPR-protein Complex Nature Structural & Molecular Biology. Dec, 2013 | Pubmed ID: 24186060 Structural Basis for the Modular Recognition of Single-stranded RNA by PPR Proteins Nature. Dec, 2013 | Pubmed ID: 24162847 A Pre-mRNA-splicing Factor is Required for RNA-directed DNA Methylation in Arabidopsis PLoS Genetics. 2013 | Pubmed ID: 24068953 Structure of a PLS-class Pentatricopeptide Repeat Protein Provides Insights into Mechanism of RNA Recognition The Journal of Biological Chemistry. Nov, 2013 | Pubmed ID: 24047899 RNA-binding Protein Regulates Plant DNA Methylation by Controlling MRNA Processing at the Intronic Heterochromatin-containing Gene IBM1 Proceedings of the National Academy of Sciences of the United States of America. Sep, 2013 | Pubmed ID: 24003136 Application of the CRISPR-Cas System for Efficient Genome Engineering in Plants Molecular Plant. Nov, 2013 | Pubmed ID: 23963532 Efficient Genome Editing in Plants Using a CRISPR/Cas System Cell Research. Oct, 2013 | Pubmed ID: 23958582 Interactions Between Soybean ABA Receptors and Type 2C Protein Phosphatases Plant Molecular Biology. Dec, 2013 | Pubmed ID: 23934343 Transcriptomic and Physiological Variations of Three Arabidopsis Ecotypes in Response to Salt Stress PloS One. 2013 | Pubmed ID: 23894403 Folate Polyglutamylation is Involved in Chromatin Silencing by Maintaining Global DNA Methylation and Histone H3K9 Dimethylation in Arabidopsis The Plant Cell. Jul, 2013 | Pubmed ID: 23881414 The PRP6-like Splicing Factor STA1 is Involved in RNA-directed DNA Methylation by Facilitating the Production of Pol V-dependent Scaffold RNAs Nucleic Acids Research. Oct, 2013 | Pubmed ID: 23877244 Chemical Probes in Plant Epigenetics Studies Plant Signaling & Behavior. Sep, 2013 | Pubmed ID: 23838953 An ABA-mimicking Ligand That Reduces Water Loss and Promotes Drought Resistance in Plants Cell Research. Aug, 2013 | Pubmed ID: 23835477 Quantitative Phosphoproteomics Identifies SnRK2 Protein Kinase Substrates and Reveals the Effectors of Abscisic Acid Action Proceedings of the National Academy of Sciences of the United States of America. Jun, 2013 | Pubmed ID: 23776212 Double Repression in Jasmonate-mediated Plant Defense Molecular Cell. May, 2013 | Pubmed ID: 23706816 Quantitative Measurement of Phosphoproteome Response to Osmotic Stress in Arabidopsis Based on Library-Assisted EXtracted Ion Chromatogram (LAXIC) Molecular & Cellular Proteomics : MCP. Aug, 2013 | Pubmed ID: 23660473 DTF1 is a Core Component of RNA-directed DNA Methylation and May Assist in the Recruitment of Pol IV Proceedings of the National Academy of Sciences of the United States of America. May, 2013 | Pubmed ID: 23637343 The Splicing Machinery Promotes RNA-directed DNA Methylation and Transcriptional Silencing in Arabidopsis The EMBO Journal. Apr, 2013 | Pubmed ID: 23524848 Linking Genes of Unknown Function with Abiotic Stress Responses by High-throughput Phenotype Screening Physiologia Plantarum. Jul, 2013 | Pubmed ID: 23517122 Mechanisms of Small RNA Generation from Cis-NATs in Response to Environmental and Developmental Cues Molecular Plant. May, 2013 | Pubmed ID: 23505223 Aequorin-based Luminescence Imaging Reveals Stimulus- and Tissue-specific Ca2+ Dynamics in Arabidopsis Plants Molecular Plant. Mar, 2013 | Pubmed ID: 23371933 Rapid Phosphatidic Acid Accumulation in Response to Low Temperature Stress in Arabidopsis is Generated Through Diacylglycerol Kinase Frontiers in Plant Science. 2013 | Pubmed ID: 23346092 Characterization and DNA-binding Specificities of Ralstonia TAL-like Effectors Molecular Plant. Jul, 2013 | Pubmed ID: 23300258 STA1, an Arabidopsis Pre-mRNA Processing Factor 6 Homolog, is a New Player Involved in MiRNA Biogenesis Nucleic Acids Research. Feb, 2013 | Pubmed ID: 23268445 Arabidopsis Proline-rich Protein Important for Development and Abiotic Stress Tolerance is Involved in MicroRNA Biogenesis Proceedings of the National Academy of Sciences of the United States of America. Oct, 2012 | Pubmed ID: 23071326 Recognition of Methylated DNA by TAL Effectors Cell Research. Oct, 2012 | Pubmed ID: 22945353 Loss of Membranous Carcinoembryonic Antigen-related Cell Adhesion Molecule 1 Expression is Related to Decreased Relapse-free Survival of Hepatocellular Carcinoma Following Liver Transplantation Chinese Medical Journal. Aug, 2012 | Pubmed ID: 22932077 Seeing the Forest for the Trees: a Wide Perspective on RNA-directed DNA Methylation Genes & Development. Aug, 2012 | Pubmed ID: 22895250 High Throughput Sequencing Reveals Novel and Abiotic Stress-regulated MicroRNAs in the Inflorescences of Rice BMC Plant Biology. 2012 | Pubmed ID: 22862743 Asg1 is a Stress-inducible Gene Which Increases Stomatal Resistance in Salt Stressed Potato Journal of Plant Physiology. Dec, 2012 | Pubmed ID: 22854180 Osmotic Stress Signaling Via Protein Kinases Cellular and Molecular Life Sciences : CMLS. Oct, 2012 | Pubmed ID: 22828864 Insights into Salt Tolerance from the Genome of Thellungiella Salsuginea Proceedings of the National Academy of Sciences of the United States of America. Jul, 2012 | Pubmed ID: 22778405 Antisilencing Role of the RNA-directed DNA Methylation Pathway and a Histone Acetyltransferase in Arabidopsis Proceedings of the National Academy of Sciences of the United States of America. Jul, 2012 | Pubmed ID: 22733760 A Histone Acetyltransferase Regulates Active DNA Demethylation in Arabidopsis Science (New York, N.Y.). Jun, 2012 | Pubmed ID: 22700931 Catalytic Mechanism and Kinase Interactions of ABA-signaling PP2C Phosphatases Plant Signaling & Behavior. May, 2012 | Pubmed ID: 22516825 Arabidopsis Serine Decarboxylase Mutants Implicate the Roles of Ethanolamine in Plant Growth and Development International Journal of Molecular Sciences. 2012 | Pubmed ID: 22489147 Sulfamethazine Suppresses Epigenetic Silencing in Arabidopsis by Impairing Folate Synthesis The Plant Cell. Mar, 2012 | Pubmed ID: 22447685 Genome-wide Analysis of Plant Nat-siRNAs Reveals Insights into Their Distribution, Biogenesis and Function Genome Biology. 2012 | Pubmed ID: 22439910 A DNA 3' Phosphatase Functions in Active DNA Demethylation in Arabidopsis Molecular Cell. Feb, 2012 | Pubmed ID: 22325353 Rapid and Highly Efficient Construction of TALE-based Transcriptional Regulators and Nucleases for Genome Modification Plant Molecular Biology. Mar, 2012 | Pubmed ID: 22271303 ROP11 GTPase Negatively Regulates ABA Signaling by Protecting ABI1 Phosphatase Activity from Inhibition by the ABA Receptor RCAR1/PYL9 in Arabidopsis Journal of Integrative Plant Biology. Mar, 2012 | Pubmed ID: 22251383 Structural Basis for Sequence-specific Recognition of DNA by TAL Effectors Science (New York, N.Y.). Feb, 2012 | Pubmed ID: 22223738 Targeted Transcriptional Repression Using a Chimeric TALE-SRDX Repressor Protein Plant Molecular Biology. Feb, 2012 | Pubmed ID: 22167390 Molecular Mimicry Regulates ABA Signaling by SnRK2 Kinases and PP2C Phosphatases Science (New York, N.Y.). Jan, 2012 | Pubmed ID: 22116026 Role of MiRNAs and SiRNAs in Biotic and Abiotic Stress Responses of Plants Biochimica Et Biophysica Acta. Feb, 2012 | Pubmed ID: 21605713 Structural Basis for Basal Activity and Autoactivation of Abscisic Acid (ABA) Signaling SnRK2 Kinases Proceedings of the National Academy of Sciences of the United States of America. Dec, 2011 | Pubmed ID: 22160701 An Atypical Component of RNA-directed DNA Methylation Machinery Has Both DNA Methylation-dependent and -independent Roles in Locus-specific Transcriptional Gene Silencing Cell Research. Dec, 2011 | Pubmed ID: 22064704 The Structure of Arabidopsis Thaliana OST1 Provides Insights into the Kinase Regulation Mechanism in Response to Osmotic Stress Journal of Molecular Biology. Nov, 2011 | Pubmed ID: 21983340 Identification and Comparative Analysis of Drought-associated MicroRNAs in Two Cowpea Genotypes BMC Plant Biology. 2011 | Pubmed ID: 21923928 A 5-methylcytosine DNA Glycosylase/lyase Demethylates the Retrotransposon Tos17 and Promotes Its Transposition in Rice Proceedings of the National Academy of Sciences of the United States of America. Sep, 2011 | Pubmed ID: 21896764 Active DNA Demethylation by Oxidation and Repair Cell Research. Dec, 2011 | Pubmed ID: 21862972 The Genome of the Extremophile Crucifer Thellungiella Parvula Nature Genetics. Sep, 2011 | Pubmed ID: 21822265 Regenerant Arabidopsis Lineages Display a Distinct Genome-wide Spectrum of Mutations Conferring Variant Phenotypes Current Biology : CB. Aug, 2011 | Pubmed ID: 21802297 The Plant Cuticle is Required for Osmotic Stress Regulation of Abscisic Acid Biosynthesis and Osmotic Stress Tolerance in Arabidopsis The Plant Cell. May, 2011 | Pubmed ID: 21610183 Epigenetics of the Epigenome Current Opinion in Plant Biology. Apr, 2011 | Pubmed ID: 21489862 RNA-directed DNA Methylation Current Opinion in Plant Biology. Apr, 2011 | Pubmed ID: 21420348 Involvement of MiR169 in the Nitrogen-starvation Responses in Arabidopsis The New Phytologist. Jun, 2011 | Pubmed ID: 21348874 Regulation and Function of DNA Methylation in Plants and Animals Cell Research. Mar, 2011 | Pubmed ID: 21321601 De Novo-engineered Transcription Activator-like Effector (TALE) Hybrid Nuclease with Novel DNA Binding Specificity Creates Double-strand Breaks Proceedings of the National Academy of Sciences of the United States of America. Feb, 2011 | Pubmed ID: 21262818 Activation of the Plasma Membrane Na/H Antiporter Salt-Overly-Sensitive 1 (SOS1) by Phosphorylation of an Auto-inhibitory C-terminal Domain Proceedings of the National Academy of Sciences of the United States of America. Feb, 2011 | Pubmed ID: 21262798 Arabidopsis Decuple Mutant Reveals the Importance of SnRK2 Kinases in Osmotic Stress Responses in Vivo Proceedings of the National Academy of Sciences of the United States of America. Jan, 2011 | Pubmed ID: 21220313 Genome Structures and Halophyte-specific Gene Expression of the Extremophile Thellungiella Parvula in Comparison with Thellungiella Salsuginea (Thellungiella Halophila) and Arabidopsis Plant Physiology. Nov, 2010 | Pubmed ID: 20833729 Identification and Mechanism of ABA Receptor Antagonism Nature Structural & Molecular Biology. Sep, 2010 | Pubmed ID: 20729862 DNA Replication Factor C1 Mediates Genomic Stability and Transcriptional Gene Silencing in Arabidopsis The Plant Cell. Jul, 2010 | Pubmed ID: 20639449 Retraction for Zhu Et Al., HOS10 Encodes an R2R3-type MYB Transcription Factor Essential for Cold Acclimation in Plants Proceedings of the National Academy of Sciences of the United States of America. Aug, 2010 | Pubmed ID: 20622156 How Many Ways Are There to Generate Small RNAs? Molecular Cell. Jun, 2010 | Pubmed ID: 20620948 ABA Receptors: the START of a New Paradigm in Phytohormone Signalling Journal of Experimental Botany. Jul, 2010 | Pubmed ID: 20522527 ABO3, a WRKY Transcription Factor, Mediates Plant Responses to Abscisic Acid and Drought Tolerance in Arabidopsis The Plant Journal : for Cell and Molecular Biology. Aug, 2010 | Pubmed ID: 20487379 A Viral Suppressor Protein Inhibits Host RNA Silencing by Hooking Up with Argonautes Genes & Development. May, 2010 | Pubmed ID: 20439425 An RNA Polymerase II- and AGO4-associated Protein Acts in RNA-directed DNA Methylation Nature. May, 2010 | Pubmed ID: 20410883 A Protein Complex Required for Polymerase V Transcripts and RNA- Directed DNA Methylation in Arabidopsis Current Biology : CB. May, 2010 | Pubmed ID: 20409711 A Cellulose Synthase-like Protein is Required for Osmotic Stress Tolerance in Arabidopsis The Plant Journal : for Cell and Molecular Biology. Jul, 2010 | Pubmed ID: 20409003 Gene Regulation During Cold Stress Acclimation in Plants Methods in Molecular Biology (Clifton, N.J.). 2010 | Pubmed ID: 20387039 Phenotypic Analysis of Arabidopsis Mutants: Germination Rate Under Salt/hormone-induced Stress Cold Spring Harbor Protocols. Apr, 2010 | Pubmed ID: 20360355 Non-coding Small RNAs Responsive to Abiotic Stress in Wheat (Triticum Aestivum L.) Functional & Integrative Genomics. May, 2010 | Pubmed ID: 20217168 RAS1, a Quantitative Trait Locus for Salt Tolerance and ABA Sensitivity in Arabidopsis Proceedings of the National Academy of Sciences of the United States of America. Mar, 2010 | Pubmed ID: 20212128 Phenotypic Analysis of Arabidopsis Mutants: Electrolyte Leakage After Freezing Stress Cold Spring Harbor Protocols. Jan, 2010 | Pubmed ID: 20150108 An SGS3-like Protein Functions in RNA-directed DNA Methylation and Transcriptional Gene Silencing in Arabidopsis The Plant Journal : for Cell and Molecular Biology. Apr, 2010 | Pubmed ID: 20059743 Phenotypic Analysis of Arabidopsis Mutants: Root Elongation Under Salt/hormone-induced Stress Cold Spring Harbor Protocols. Nov, 2009 | Pubmed ID: 20150051 In Vitro Reconstitution of an Abscisic Acid Signalling Pathway Nature. Dec, 2009 | Pubmed ID: 19924127 A Conserved Transcriptional Regulator is Required for RNA-directed DNA Methylation and Plant Development Genes & Development. Dec, 2009 | Pubmed ID: 19903758 A Gate-latch-lock Mechanism for Hormone Signalling by Abscisic Acid Receptors Nature. Dec, 2009 | Pubmed ID: 19898420 Protein-protein Interactions of Tandem Affinity Purified Protein Kinases from Rice PloS One. 2009 | Pubmed ID: 19690613 Active DNA Demethylation Mediated by DNA Glycosylases Annual Review of Genetics. 2009 | Pubmed ID: 19659441 Disruption of Arabidopsis CHY1 Reveals an Important Role of Metabolic Status in Plant Cold Stress Signaling Molecular Plant. Jan, 2009 | Pubmed ID: 19529827 Overexpression of SOS (Salt Overly Sensitive) Genes Increases Salt Tolerance in Transgenic Arabidopsis Molecular Plant. Jan, 2009 | Pubmed ID: 19529826 Abiotic Stress Tolerance: from Gene Discovery in Model Organisms to Crop Improvement Molecular Plant. Jan, 2009 | Pubmed ID: 19529825 An Autophosphorylation Site of the Protein Kinase SOS2 is Important for Salt Tolerance in Arabidopsis Molecular Plant. Jan, 2009 | Pubmed ID: 19529820 Arabidopsis Mutant Deficient in 3 Abscisic Acid-activated Protein Kinases Reveals Critical Roles in Growth, Reproduction, and Stress Proceedings of the National Academy of Sciences of the United States of America. May, 2009 | Pubmed ID: 19420218 An Effector of RNA-directed DNA Methylation in Arabidopsis is an ARGONAUTE 4- and RNA-binding Protein Cell. May, 2009 | Pubmed ID: 19410546 Abscisic Acid Inhibits Type 2C Protein Phosphatases Via the PYR/PYL Family of START Proteins Science (New York, N.Y.). May, 2009 | Pubmed ID: 19407142 RNA-directed DNA Methylation and Demethylation in Plants Science in China. Series C, Life Sciences / Chinese Academy of Sciences. Apr, 2009 | Pubmed ID: 19381459 Bioinformatics Analysis Suggests Base Modifications of TRNAs and MiRNAs in Arabidopsis Thaliana BMC Genomics. 2009 | Pubmed ID: 19358740 SIK1/SOS2 Networks: Decoding Sodium Signals Via Calcium-responsive Protein Kinase Pathways Pflügers Archiv : European Journal of Physiology. Jul, 2009 | Pubmed ID: 19247687 NRPD4, a Protein Related to the RPB4 Subunit of RNA Polymerase II, is a Component of RNA Polymerases IV and V and is Required for RNA-directed DNA Methylation Genes & Development. Feb, 2009 | Pubmed ID: 19204117 Epigenetic Regulation of Stress Responses in Plants Current Opinion in Plant Biology. Apr, 2009 | Pubmed ID: 19179104 Subunit Compositions of the RNA-silencing Enzymes Pol IV and Pol V Reveal Their Origins As Specialized Forms of RNA Polymerase II Molecular Cell. Jan, 2009 | Pubmed ID: 19110459 A Rice Kinase-protein Interaction Map Plant Physiology. Mar, 2009 | Pubmed ID: 19109415 Genome-wide Identification and Analysis of Small RNAs Originated from Natural Antisense Transcripts in Oryza Sativa Genome Research. Jan, 2009 | Pubmed ID: 18971307 Criteria for Annotation of Plant MicroRNAs The Plant Cell. Dec, 2008 | Pubmed ID: 19074682 Abscisic Acid-mediated Epigenetic Processes in Plant Development and Stress Responses Journal of Integrative Plant Biology. Oct, 2008 | Pubmed ID: 19017106 ROS3 is an RNA-binding Protein Required for DNA Demethylation in Arabidopsis Nature. Oct, 2008 | Pubmed ID: 18815596 The Arabidopsis NFYA5 Transcription Factor is Regulated Transcriptionally and Posttranscriptionally to Promote Drought Resistance The Plant Cell. Aug, 2008 | Pubmed ID: 18682547 Functional Gene-mining for Salt-tolerance Genes with the Power of Arabidopsis The Plant Journal : for Cell and Molecular Biology. Nov, 2008 | Pubmed ID: 18643972 SCREAM/ICE1 and SCREAM2 Specify Three Cell-state Transitional Steps Leading to Arabidopsis Stomatal Differentiation The Plant Cell. Jul, 2008 | Pubmed ID: 18641265 Reconstituting Plant MiRNA Biogenesis Proceedings of the National Academy of Sciences of the United States of America. Jul, 2008 | Pubmed ID: 18632572 Dolichol Biosynthesis and Its Effects on the Unfolded Protein Response and Abiotic Stress Resistance in Arabidopsis The Plant Cell. Jul, 2008 | Pubmed ID: 18612099 Identification of Cold-inducible MicroRNAs in Plants by Transcriptome Analysis Biochimica Et Biophysica Acta. Nov, 2008 | Pubmed ID: 18471443 Epigenome Sequencing Comes of Age Cell. May, 2008 | Pubmed ID: 18455978 Activated Expression of an Arabidopsis HD-START Protein Confers Drought Tolerance with Improved Root System and Reduced Stomatal Density The Plant Cell. Apr, 2008 | Pubmed ID: 18451323 Novel and Nodulation-regulated MicroRNAs in Soybean Roots BMC Genomics. 2008 | Pubmed ID: 18402695 Involvement of Arabidopsis HOS15 in Histone Deacetylation and Cold Tolerance Proceedings of the National Academy of Sciences of the United States of America. Mar, 2008 | Pubmed ID: 18356294 Annotating Genes of Known and Unknown Function by Large-scale Coexpression Analysis Plant Physiology. May, 2008 | Pubmed ID: 18354039 Identification of Novel and Candidate MiRNAs in Rice by High Throughput Sequencing BMC Plant Biology. 2008 | Pubmed ID: 18312648 A Probabilistic Method for Small RNA Flowgram Matching Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing. 2008 | Pubmed ID: 18229677 Small RNAs and the Regulation of Cis-natural Antisense Transcripts in Arabidopsis BMC Molecular Biology. 2008 | Pubmed ID: 18194570 Reactive Oxygen Species Mediate Na+-induced SOS1 MRNA Stability in Arabidopsis The Plant Journal : for Cell and Molecular Biology. Feb, 2008 | Pubmed ID: 17996020 Distinctive Core Histone Post-translational Modification Patterns in Arabidopsis Thaliana PloS One. 2007 | Pubmed ID: 18030344 SOS2 Promotes Salt Tolerance in Part by Interacting with the Vacuolar H+-ATPase and Upregulating Its Transport Activity Molecular and Cellular Biology. Nov, 2007 | Pubmed ID: 17875927 New Developments in Abscisic Acid Perception and Metabolism Current Opinion in Plant Biology. Oct, 2007 | Pubmed ID: 17875396 Cold Stress Regulation of Gene Expression in Plants Trends in Plant Science. Oct, 2007 | Pubmed ID: 17855156 Interaction of SOS2 with Nucleoside Diphosphate Kinase 2 and Catalases Reveals a Point of Connection Between Salt Stress and H2O2 Signaling in Arabidopsis Thaliana Molecular and Cellular Biology. Nov, 2007 | Pubmed ID: 17785451 Small RNAs As Big Players in Plant Abiotic Stress Responses and Nutrient Deprivation Trends in Plant Science. Jul, 2007 | Pubmed ID: 17573231 Control of DNA Methylation and Heterochromatic Silencing by Histone H2B Deubiquitination Nature. Jun, 2007 | Pubmed ID: 17554311 Cloning and Characterization of MicroRNAs from Wheat (Triticum Aestivum L.) Genome Biology. 2007 | Pubmed ID: 17543110 The Structure of the C-terminal Domain of the Protein Kinase AtSOS2 Bound to the Calcium Sensor AtSOS3 Molecular Cell. May, 2007 | Pubmed ID: 17499048 An Enhancer Mutant of Arabidopsis Salt Overly Sensitive 3 Mediates Both Ion Homeostasis and the Oxidative Stress Response Molecular and Cellular Biology. Jul, 2007 | Pubmed ID: 17485445 Arabidopsis Protein Kinase PKS5 Inhibits the Plasma Membrane H+ -ATPase by Preventing Interaction with 14-3-3 Protein The Plant Cell. May, 2007 | Pubmed ID: 17483306 Interplay Between Cold-responsive Gene Regulation, Metabolism and RNA Processing During Plant Cold Acclimation Current Opinion in Plant Biology. Jun, 2007 | Pubmed ID: 17468037 Role of Arabidopsis AGO6 in SiRNA Accumulation, DNA Methylation and Transcriptional Gene Silencing The EMBO Journal. Mar, 2007 | Pubmed ID: 17332757 Altered ABA, Proline and Hydrogen Peroxide in an Arabidopsis Glutamate:glyoxylate Aminotransferase Mutant Plant Molecular Biology. May, 2007 | Pubmed ID: 17318317 Identification of Two Protein Kinases Required for Abscisic Acid Regulation of Seed Germination, Root Growth, and Gene Expression in Arabidopsis The Plant Cell. Feb, 2007 | Pubmed ID: 17307925 The DNA Glycosylase/lyase ROS1 Functions in Pruning DNA Methylation Patterns in Arabidopsis Current Biology : CB. Jan, 2007 | Pubmed ID: 17208187 Recognition of a PP2C Interaction Motif in Several Plant Protein Kinases Methods in Molecular Biology (Clifton, N.J.). 2007 | Pubmed ID: 17200569 Conservation of the Salt Overly Sensitive Pathway in Rice Plant Physiology. Feb, 2007 | Pubmed ID: 17142477 Cold Transiently Activates Calcium-permeable Channels in Arabidopsis Mesophyll Cells Plant Physiology. Jan, 2007 | Pubmed ID: 17114272 The Protein Kinase TOUSLED is Required for Maintenance of Transcriptional Gene Silencing in Arabidopsis EMBO Reports. Jan, 2007 | Pubmed ID: 17110953 Gain- and Loss-of-function Mutations in Zat10 Enhance the Tolerance of Plants to Abiotic Stress FEBS Letters. Dec, 2006 | Pubmed ID: 17112521 A Pathogen-inducible Endogenous SiRNA in Plant Immunity Proceedings of the National Academy of Sciences of the United States of America. Nov, 2006 | Pubmed ID: 17071740 A Putative Arabidopsis Nucleoporin, AtNUP160, is Critical for RNA Export and Required for Plant Tolerance to Cold Stress Molecular and Cellular Biology. Dec, 2006 | Pubmed ID: 17030626 The Plasma Membrane Na+/H+ Antiporter SOS1 Interacts with RCD1 and Functions in Oxidative Stress Tolerance in Arabidopsis Proceedings of the National Academy of Sciences of the United States of America. Dec, 2006 | Pubmed ID: 17023541 A R2R3 Type MYB Transcription Factor is Involved in the Cold Regulation of CBF Genes and in Acquired Freezing Tolerance The Journal of Biological Chemistry. Dec, 2006 | Pubmed ID: 17015446 Mutations in ABO1/ELO2, a Subunit of Holo-Elongator, Increase Abscisic Acid Sensitivity and Drought Tolerance in Arabidopsis Thaliana Molecular and Cellular Biology. Sep, 2006 | Pubmed ID: 16943431 Mutation of SAD2, an Importin Beta-domain Protein in Arabidopsis, Alters Abscisic Acid Sensitivity The Plant Journal : for Cell and Molecular Biology. Sep, 2006 | Pubmed ID: 16889648 Role of the Arabidopsis DNA Glycosylase/lyase ROS1 in Active DNA Demethylation Proceedings of the National Academy of Sciences of the United States of America. Aug, 2006 | Pubmed ID: 16864782 Salt Stress Affects Cortical Microtubule Organization and Helical Growth in Arabidopsis Plant & Cell Physiology. Aug, 2006 | Pubmed ID: 16861712 Posttranscriptional Induction of Two Cu/Zn Superoxide Dismutase Genes in Arabidopsis is Mediated by Downregulation of MiR398 and Important for Oxidative Stress Tolerance The Plant Cell. Aug, 2006 | Pubmed ID: 16861386 What Makes Species Unique? The Contribution of Proteins with Obscure Features Genome Biology. 2006 | Pubmed ID: 16859532 Osmogenetics: Aristotle to Arabidopsis The Plant Cell. Jul, 2006 | Pubmed ID: 16809814 Nomenclature for HKT Transporters, Key Determinants of Plant Salinity Tolerance Trends in Plant Science. Aug, 2006 | Pubmed ID: 16809061 STABILIZED1, a Stress-upregulated Nuclear Protein, is Required for Pre-mRNA Splicing, MRNA Turnover, and Stress Tolerance in Arabidopsis The Plant Cell. Jul, 2006 | Pubmed ID: 16751345 EMS Mutagenesis of Arabidopsis Methods in Molecular Biology (Clifton, N.J.). 2006 | Pubmed ID: 16739570 The Negative Regulator of Plant Cold Responses, HOS1, is a RING E3 Ligase That Mediates the Ubiquitination and Degradation of ICE1 Proceedings of the National Academy of Sciences of the United States of America. May, 2006 | Pubmed ID: 16702557 Protein-protein Interactions of Tandem Affinity Purification-tagged Protein Kinases in Rice The Plant Journal : for Cell and Molecular Biology. Apr, 2006 | Pubmed ID: 16553892 Methods and Concepts in Quantifying Resistance to Drought, Salt and Freezing, Abiotic Stresses That Affect Plant Water Status The Plant Journal : for Cell and Molecular Biology. Feb, 2006 | Pubmed ID: 16441347 Salt Stress Signaling and Mechanisms of Plant Salt Tolerance Genetic Engineering. 2006 | Pubmed ID: 16382876 ROR1/RPA2A, a Putative Replication Protein A2, Functions in Epigenetic Gene Silencing and in Regulation of Meristem Development in Arabidopsis The Plant Cell. Jan, 2006 | Pubmed ID: 16326925 Endogenous SiRNAs Derived from a Pair of Natural Cis-antisense Transcripts Regulate Salt Tolerance in Arabidopsis Cell. Dec, 2005 | Pubmed ID: 16377568 A MiRNA Involved in Phosphate-starvation Response in Arabidopsis Current Biology : CB. Nov, 2005 | Pubmed ID: 16303564 Mutations in a Conserved Replication Protein Suppress Transcriptional Gene Silencing in a DNA-methylation-independent Manner in Arabidopsis Current Biology : CB. Nov, 2005 | Pubmed ID: 16271867 The Arabidopsis Cold-responsive Transcriptome and Its Regulation by ICE1 The Plant Cell. Nov, 2005 | Pubmed ID: 16214899 Preventing Transcriptional Gene Silencing by Active DNA Demethylation FEBS Letters. Oct, 2005 | Pubmed ID: 16162337 Identification and Characterization of Endogenous Small Interfering RNAs from Rice Nucleic Acids Research. 2005 | Pubmed ID: 16077027 Disruption of the Cellulose Synthase Gene, AtCesA8/IRX1, Enhances Drought and Osmotic Stress Tolerance in Arabidopsis The Plant Journal : for Cell and Molecular Biology. Jul, 2005 | Pubmed ID: 15998313 Role of an Arabidopsis AP2/EREBP-type Transcriptional Repressor in Abscisic Acid and Drought Stress Responses The Plant Cell. Aug, 2005 | Pubmed ID: 15994908 HOS10 Encodes an R2R3-type MYB Transcription Factor Essential for Cold Acclimation in Plants Proceedings of the National Academy of Sciences of the United States of America. Jul, 2005 | Pubmed ID: 15994234 Cloning and Characterization of MicroRNAs from Rice The Plant Cell. May, 2005 | Pubmed ID: 15805478 The Structure of the Arabidopsis Thaliana SOS3: Molecular Mechanism of Sensing Calcium for Salt Stress Response Journal of Molecular Biology. Feb, 2005 | Pubmed ID: 15644219 A DEAD Box RNA Helicase is Essential for MRNA Export and Important for Development and Stress Responses in Arabidopsis The Plant Cell. Jan, 2005 | Pubmed ID: 15598798 A Single Amino Acid Substitution in the Arabidopsis FIERY1/HOS2 Protein Confers Cold Signaling Specificity and Lithium Tolerance The Plant Journal : for Cell and Molecular Biology. Nov, 2004 | Pubmed ID: 15500469 AtHKT1 Facilitates Na+ Homeostasis and K+ Nutrition in Planta Plant Physiology. Sep, 2004 | Pubmed ID: 15347798 Novel and Stress-regulated MicroRNAs and Other Small RNAs from Arabidopsis The Plant Cell. Aug, 2004 | Pubmed ID: 15258262 Comparative Genomics in Salt Tolerance Between Arabidopsis and ARabidopsis-related Halophyte Salt Cress Using Arabidopsis Microarray Plant Physiology. Jul, 2004 | Pubmed ID: 15247402 Salt Cress. A Halophyte and Cryophyte Arabidopsis Relative Model System and Its Applicability to Molecular Genetic Analyses of Growth and Development of Extremophiles Plant Physiology. Jul, 2004 | Pubmed ID: 15247369 A Probable Na+(K+)/H+ Exchanger on the Chloroplast Envelope Functions in PH Homeostasis and Chloroplast Development in Arabidopsis Thaliana Proceedings of the National Academy of Sciences of the United States of America. Jul, 2004 | Pubmed ID: 15220473 An Arabidopsis Homeodomain Transcription Factor Gene, HOS9, Mediates Cold Tolerance Through a CBF-independent Pathway Proceedings of the National Academy of Sciences of the United States of America. Jun, 2004 | Pubmed ID: 15205481 From Laboratory to Field. Using Information from Arabidopsis to Engineer Salt, Cold, and Drought Tolerance in Crops Plant Physiology. Jun, 2004 | Pubmed ID: 15173567 The SOS3 Family of Calcium Sensors and SOS2 Family of Protein Kinases in Arabidopsis Plant Physiology. Mar, 2004 | Pubmed ID: 15020756 Transgenic Evaluation of Activated Mutant Alleles of SOS2 Reveals a Critical Requirement for Its Kinase Activity and C-terminal Regulatory Domain for Salt Tolerance in Arabidopsis Thaliana The Plant Cell. Feb, 2004 | Pubmed ID: 14742879 Molecular Genetic Perspectives on Cross-talk and Specificity in Abiotic Stress Signalling in Plants Journal of Experimental Botany. Jan, 2004 | Pubmed ID: 14673035 The Protein Kinase SOS2 Activates the Arabidopsis H(+)/Ca(2+) Antiporter CAX1 to Integrate Calcium Transport and Salt Tolerance The Journal of Biological Chemistry. Jan, 2004 | Pubmed ID: 14583601 PLANT CELLULAR AND MOLECULAR RESPONSES TO HIGH SALINITY Annual Review of Plant Physiology and Plant Molecular Biology. Jun, 2000 | Pubmed ID: 15012199 Medindo espacial e temporal Ca Xiaohong Zhu1, Aaron Taylor2, Shenyu Zhang1, Dayong Zhang1,3, Ying Feng1,4, Gaimei Liang1,5, Jian-Kang Zhu1,6 1Department of Horticulture and Landscape Architecture, Purdue University, 2Bindley Bioscience Center, Purdue University, 3Institute of Biotechnology, Jiangsu Academy of Agricultural Sciences, 4College of Environmental & Resource Science, Zhejiang University, 5Dryland Agriculture Research Centre, Shanxi Academy of Agricultural Sciences, 6Shanghai Center for Plant Stress Biology, Chinese Academy of Sciences JoVE 51945 Biologia
Medindo espacial e temporal Ca Xiaohong Zhu1, Aaron Taylor2, Shenyu Zhang1, Dayong Zhang1,3, Ying Feng1,4, Gaimei Liang1,5, Jian-Kang Zhu1,6 1Department of Horticulture and Landscape Architecture, Purdue University, 2Bindley Bioscience Center, Purdue University, 3Institute of Biotechnology, Jiangsu Academy of Agricultural Sciences, 4College of Environmental & Resource Science, Zhejiang University, 5Dryland Agriculture Research Centre, Shanxi Academy of Agricultural Sciences, 6Shanghai Center for Plant Stress Biology, Chinese Academy of Sciences JoVE 51945 Biologia