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JoVE Journal
Biology

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A Semiautomated ChIP-Seq Procedure for Large-scale Epigenetic Studies
 

A Semiautomated ChIP-Seq Procedure for Large-scale Epigenetic Studies

Article DOI: 10.3791/61617-v 08:04 min August 13th, 2020
August 13th, 2020

챕터

요약

This paper describes a semiautomated, microscaled ChIP-Seq protocol of DNA regions associated with a specific histone modification (H3K27ac) using a ChIP liquid-handler platform, followed by library preparation using tagmentation. The procedure includes control assessment for quality and quantity purposes and can be adopted to other histone modifications or transcription factors.

Tags

Semiautomated ChIP-Seq High-throughput Epigenetic Studies Cis-regulatory Mechanisms Disease Implications Reproducibility Reduction Of Hands-on Lab Time Chromatin Shearing Lysis Buffer Cell Pellet Incubation Resuspension Sonication Histone Modification TC1 Buffer Chromatin Tubes
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