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DamID-seq: Genome-wide Kortlægning af protein-DNA interaktioner af High Throughput sekventering af adenin-methylerede DNA fragmenter
JoVE Journal
Biology
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JoVE Journal Biology
DamID-seq: Genome-wide Mapping of Protein-DNA Interactions by High Throughput Sequencing of Adenine-methylated DNA Fragments
DOI:

09:14 min

January 27, 2016

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Chapters

  • 00:05Title
  • 00:58Generation and Expression of Fusion Proteins and Free Dam Proteins
  • 03:12Library Preparation: Fragmentation
  • 05:29Library Preparation: Size Selection
  • 07:26Results: Detecting Lamin B1 Binding Regions on the Mouse Chromosome One
  • 08:20Conclusion

Summary

Automatic Translation

Vi beskriver heri et assay ved kobling DNA methyltransferase adenin identifikation (DamID) til high throughput sekventering (DamID-seq). Denne forbedrede fremgangsmåde giver en højere opløsning og en større dynamikområde og muliggør analyse DamID-seq data i forbindelse med andre højt gennemløb sekventering data såsom chip-seq, RNA-seq, etc.

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