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生物信息学管道,用于准确、高效地分析植物中的微RNA转录
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A Bioinformatics Pipeline to Accurately and Efficiently Analyze the MicroRNA Transcriptomes in Plants
Please note that all translations are automatically generated.
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生物信息学管道,用于准确、高效地分析植物中的微RNA转录
DOI:
10.3791/59864-v
•
06:34 min
•
January 21, 2020
•
Ying Wang*
1,2
,
Zheng Kuang*
1,2
,
Lei Li
,
Xiaozeng Yang
1
Beijing Key Laboratory of Agricultural Genetic Resources and Biotechnology, Beijing Agro-Biotechnology Research Center
,
Beijing Academy of Agriculture and Forestry Sciences
,
2
State Key Laboratory of Protein and Plant Gene Research, Peking-Tsinghua Center for Life Sciences, School of Advanced Agricultural Sciences and School of Life Sciences
,
Peking University
Chapters
00:04
Title
01:15
Installation and Testing
02:56
Identifying Novel MicroRNAs (miRNAs)
03:33
Reference Index Building
04:42
Results: Representative miRDP2 Performance
05:45
Conclusion
Summary
Automatic Translation
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Automatic Translation
生物信息学管道,即miRDeep-P2(简称miRDP2),具有更新的植物miRNA标准和经过全面检查的算法,可以准确有效地分析植物中的微RNA转录,特别是对于具有复杂和大型基因组的物种。
Tags
Bioinformatics Pipeline
MicroRNA Transcriptomes
Plants
MiRDeep2
Plant MicroRNAs
Transcriptional Regulators
Plant Development
Environmental Challenges
False Positives
Processing Time
High Confidence MicroRNA Annotation
Genome Function
MiRDeep2 Pipeline
Arabidopsis Thaliana
Genome Reference Index
Noncoding RNA Reference Index
Deep Sequencing Reads
Adapters
FASTA Identifiers
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