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IR-TEx：专为疟疾病媒阿诺菲斯甘巴病设计的大数据转录组学的开源数据集成工具

JoVE Journal
Biology

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JoVE Journal Biology

IR-TEx: An Open Source Data Integration Tool for Big Data Transcriptomics Designed for the Malaria Vector Anopheles gambiae

Please note that all translations are automatically generated. Click here for the English version.

IR-TEx：专为疟疾病媒阿诺菲斯甘巴病设计的大数据转录组学的开源数据集成工具

DOI:

10.3791/60721-v

•

08:22 min

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January 15, 2020

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Victoria A. Ingham, Andrew Bennett, Duo Peng, Simon C. Wagstaff, Hilary Ranson

¹Vector Biology,Liverpool School of Tropical Medicine, ²Research Computing Unit,Liverpool School of Tropical Medicine, ³Department of Immunology and Infectious Diseases,Harvard T.H. Chan School of Public Health

Chapters

00:04Title
00:30Using the IR-TEx Web Application
03:57Downloading and Implementing IR-TEx Locally
04:52Modifying IR-TEx for use with Different Datasets
06:05Results: Microsomal GST Contributes to Insecticide Resistance in Anopheles gambiae and Anopheles coluzzii Mosquitoes from Cte D Ivoire and Burkina Faso
07:31Conclusion

Summary

Automatic Translation

IR-TEx探索了阿诺菲莱斯甘丹鱼物种中与杀虫剂耐药性相关的转录谱。此处提供了有关使用该应用程序的完整说明、用于探索多个转录组数据集的修改，以及使用该框架构建一个交互式数据库，用于从任何组织中提取转录数据（在任何平台中生成）。

Tags

Keywords: Data Integration Transcriptomics Anopheles Gambiae IR-TEx Web Application Gene Expression Insecticide Resistance Pyrethroid Anopheles Coluzzii Fold Change Adjusted P-value Data Download

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